amiD:Gene Product(s): Difference between revisions

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!Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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!Partner Type!!Partner!!Notes
!Partner Type!!Partner!!Notes
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!Compartment!!Description!!Evidence!!Notes
!Compartment!!Description!!Evidence!!Notes
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56380 - 56505 (calc based on 12 Y, 7 W, and 1 C residues)  
56380 - 56505 (calc based on 12 Y, 7 W, and 1 C residues)  
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!Type!!Residues!!Description!!Notes
!Type!!Residues!!Description!!Notes
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!Structure Type!!Organism!!Accession!!Residues covered!!Notes
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!Resource type!!Source!!Notes/Reference
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Revision as of 09:00, 30 April 2008

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

YbjR product

Synonyms

predicted amidase and lipoprotein product[1], YbjR product[2][1], B0867 product[2][1]

Product description

predicted amidase and lipoprotein[2][3]

EC number (for enzymes)
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Notes

Function

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Gene Ontology

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
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Interactions

Partner Type Partner Notes
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Notes

Localization

Compartment Description Evidence Notes
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Notes

Structure and Physical Properties

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Physical Properties

Sequence

at EcoCyc 

MRRFFWLVAA ALLLAGCAGE KGIVEKEGYQ LDTRRQAQAA YPRIKVLVIH YTADDFDSSL
ATLTDKQVSS HYLVPAVPPR YNGKPRIWQL VPEQELAWHA GISAWRGATR LNDTSIGIEL
ENRGWQKSAG VKYFAPFEPA QIQALIPLAK DIIARYHIKP ENVVAHADIA PQRKDDPGPL
FPWQQLAQQG IGAWPDAQRV NFYLAGRAPH TPVDTASLLE LLARYGYDVK PDMTPREQRR
VIMAFQMHFR PTLYNGEADA ETQAIAEALL EKYGQD
Mol. Wt

31.07 kDa (calc) [2]

pI
Extinction coefficient

56380 - 56505 (calc based on 12 Y, 7 W, and 1 C residues)

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Domains/Motifs/Modification Sites

Type Residues Description Notes
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Structure

Structure Type Organism Accession Residues covered Notes
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Notes

Gene Product Resources

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Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:G6452-MONOMER

SwissModel (EcoliWiki Page)

SwissModel:P75820

UniProt (EcoliWiki Page)

UniProt:P75820

PFAM (EcoliWiki Page)

PFAM:PF01510

RefSeq (EcoliWiki Page)

RefSeq:NP_415388

ModBase (EcoliWiki Page)

ModBase:P75820

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Notes

Links

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Name URL Comments
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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7


Categories

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