ada:Gene Product(s): Difference between revisions

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{{Tab|Quickview|ada}}{{Tab|Gene|ada}}{{Tab On|Gene Product(s)|ada}}{{Tab|Expression|ada}}{{Tab|Evolution|ada}}{{Tab|On One Page|ada}}{{TabsBottom}}
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|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
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</noinclude>
</noinclude>[[Category:GO:0005737_!_cytoplasm]][[Category:GO:0006281_!_DNA repair]][[Category:GO:0006350_!_transcription]][[Category:GO:0016563_!_transcription activator activity]][[Category:GO:0016564_!_transcription repressor activity]]
==Nomenclature==
==Nomenclature==
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!{{table heading style}} |Synonyms
!{{table heading style}} |Synonyms
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|
fused DNA-binding transcriptional dual regulator<ref name='LIB:Riley_2006'/>, O6-methylguanine-DNA methyltransferase<ref name='LIB:Riley_2006'/>, B2213<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Ada<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
fused DNA-binding transcriptional dual regulator product<ref name='LIB:Riley_2006'/>, O6-methylguanine-DNA methyltransferase product<ref name='LIB:Riley_2006'/>, B2213 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Ada product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
|-
|-
!{{table heading style}} |Product description
!{{table heading style}} |Product description
|
|
Ada transcriptional dual regulator<ref name='LIB:EcoCyc10.6'/>; Ada transcriptional dual regulator<ref name='LIB:EcoCyc11.1'/>
Ada transcriptional dual regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>


|-
|-
!{{table heading style}} |EC number (for enzymes)
!{{table heading style}} |EC number (for enzymes)
|
|
*[http://www.brenda.uni-koeln.de/php/result_flat.php4?ecno=2.1.1.63 2.1.1.63]<ref name='LIB:Riley_2006'/>
** [http://www.brenda.uni-koeln.de/php/result_flat.php4?ecno=2.1.1.63 2.1.1.63]<ref name='LIB:Riley_2006'/>
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==Function==
==Function==
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===Gene Ontology===
<big>'''Gene Ontology'''</big>
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!Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
!Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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GO:0016563  
GO:0016563  
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transcriptional activator activity  
transcription activator activity  
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GO:0016564  
GO:0016564  
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transcriptional repressor activity  
transcription repressor activity  
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required fields missing   
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===Interactions===
 
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<span id="Interactions"></span><big>'''Interactions'''</big>
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===Notes===
===Notes===


==Localization==
==Localization==
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{|class = 'sortable' {{Prettytable}} id='47634'  
{|class = 'sortable' {{Prettytable}} id='167718'  
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!Compartment!!Description!!Evidence!!Notes
!Compartment!!Description!!Evidence!!Notes
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From EcoCyc<ref name='LIB:EcoCyc11.1'/>   
From EcoCyc<ref name='LIB:EcoCyc11.1'/>   
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===Notes===
===Notes===


==Structure and Physical Properties==
==Structure and Physical Properties==
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===Physical Properties===
<span id="Sequence"></span><big>'''Physical Properties'''</big>
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36440 - 37940 (calc based on 6 Y, 5 W, and 12 C residues)  
36440 - 37940 (calc based on 6 Y, 5 W, and 12 C residues)  
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===Domains/Motifs/Modification Sites===
 
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<big>'''Domains/Motifs/Modification Sites'''</big>
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===Structure===


<span id="Structure"></span><big>'''Structure'''</big>
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!Structure Type!!Organism!!Accession!!Residues covered!!Notes
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==Gene Product Resources==
==Gene Product Resources==
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!Resource type!!Source!!Notes/Reference
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===Notes===
===Notes===


==Accessions in Other Databases==
==Accessions in Other Databases==
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==Links==
==Links==
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==References==
==References==
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<references/>
<references/>
__NOTOC__
__NOTOC__
[[Category:GO:0005737]][[Category:GO:0006281]][[Category:GO:0006350]][[Category:GO:0016563]][[Category:GO:0016564]][[Category:Location:membrane]]</noinclude>
</noinclude>

Revision as of 13:48, 28 July 2007

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

Ada product

Synonyms

fused DNA-binding transcriptional dual regulator product[1], O6-methylguanine-DNA methyltransferase product[1], B2213 product[2][1], Ada product[2][1]

Product description

Ada transcriptional dual regulator[2][3]

EC number (for enzymes)
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Notes

Function

[back to top]


Gene Ontology

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status

GO:0005737

cytoplasm

C

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0006281

DNA repair

P

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0006350

transcription

P

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0016563

transcription activator activity

F

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0016564

transcription repressor activity

F

Seeded from EcoCyc 11.1[3].

required fields missing

edit table

See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Interactions

Partner Type Partner Notes
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See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Notes

Localization

Compartment Description Evidence Notes

membrane

From EcoCyc[3]

edit table


Notes

Structure and Physical Properties

[back to top]


Physical Properties

Sequence

at EcoCyc 

MKKATCLTDD QRWQSVLARD PNADGEFVFA VRTTGIFCRP SCRARHALRE NVSFYANASE
ALAAGFRPCK RCQPEKANAQ QHRLDKITHA CRLLEQETPV TLEALADQVA MSPFHLHRLF
KATTGMTPKA WQQAWRARRL RESLAKGESV TTSILNAGFP DSSSYYRKAD ETLGMTAKQF
RHGGENLAVR YALADCELGR CLVAESERGI CAILLGDDDA TLISELQQMF PAADNAPADL
MFQQHVREVI ASLNQRDTPL TLPLDIRGTA FQQQVWQALR TIPCGETVSY QQLANAIGKP
KAVRAVASAC AANKLAIIIP CHRVVRGDGT LSGYRWGVSR KAQLLRREAE NEER
Mol. Wt

39.32 kDa (calc) [2]

pI

8.69[2]

Extinction coefficient

36440 - 37940 (calc based on 6 Y, 5 W, and 12 C residues)

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See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Domains/Motifs/Modification Sites

Type Residues Description Notes
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Structure

Structure Type Organism Accession Residues covered Notes
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Notes

Gene Product Resources

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Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:PD00230

UniProt (EcoliWiki Page)

UniProt:P06134

PFAM (EcoliWiki Page)

PFAM:PF02805

RefSeq (EcoliWiki Page)

RefSeq:NP_416717

ModBase (EcoliWiki Page)

ModBase:P06134

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Notes

Links

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Name URL Comments
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References

[back to top]


See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7


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