rrlH:Gene Product(s): Difference between revisions

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<noinclude>{{TabsTop}}
<noinclude>{{TabsTop}}
{{Tab|Quickview|rrlH}}{{Tab|Gene|rrlH}}{{Tab On|Gene Product(s)|rrlH}}{{Tab|Expression|rrlH}}{{Tab|Evolution|rrlH}}{{Tab|On One Page|rrlH}}{{TabsBottom}}
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|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
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</noinclude>
</noinclude>[[Category:GO:0016072_!_rRNA metabolic process]][[Category:GO:0009281_!_cytosolic ribosome (sensu Bacteria)]][[Category:GO:0006412_!_translation]][[Category:GO:0005737_!_cytoplasm]]
==Nomenclature==
==Nomenclature==
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{|{{Prettytable}}
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!{{table heading style}} |Synonyms
!{{table heading style}} |Synonyms
|
|
23S rRNA (rrlH)<ref name='LIB:Riley_2006'/>, 23S rRNA (rrlG)<ref name='LIB:Riley_2006'/>, 23S rRNA (rrlD)<ref name='LIB:Riley_2006'/>, 23S rRNA (rrlC)<ref name='LIB:Riley_2006'/>, 23S rRNA (rrlA)<ref name='LIB:Riley_2006'/>, 23S rRNA (rrlB)<ref name='LIB:Riley_2006'/>, 23S rRNA (rrlE)<ref name='LIB:Riley_2006'/>, rrlH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, rrnH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
23S rRNA (rrlH) product<ref name='LIB:Riley_2006'/>, 23S rRNA (rrlG) product<ref name='LIB:Riley_2006'/>, 23S rRNA (rrlD) product<ref name='LIB:Riley_2006'/>, 23S rRNA (rrlC) product<ref name='LIB:Riley_2006'/>, 23S rRNA (rrlA) product<ref name='LIB:Riley_2006'/>, 23S rRNA (rrlB) product<ref name='LIB:Riley_2006'/>, 23S rRNA (rrlE) product<ref name='LIB:Riley_2006'/>, rrlH product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, rrnH product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
|-
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!{{table heading style}} |Product description
!{{table heading style}} |Product description
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rrlH 23S ribosomal RNA<ref name='LIB:EcoCyc10.6'/>; rrlH 23S ribosomal RNA<ref name='LIB:EcoCyc11.1'/>
rrlH 23S ribosomal RNA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
 
Component of ; [[:Category:Complex:50S ribosomal subunit|50S ribosomal subunit]]<ref name='LIB:EcoCyc11.1'/>


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==Function==
==Function==
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===Gene Ontology===
<big>'''Gene Ontology'''</big>
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!Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
!Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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===Interactions===
 
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<span id="Interactions"></span><big>'''Interactions'''</big>
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!Partner Type!!Partner!!Notes
!Partner Type!!Partner!!Notes
|-
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Protein
|
Subunits of [[:Category:Complex:50S ribosomal subunit|50S ribosomal subunit]]
|
could be indirect 
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===Notes===
===Notes===


==Localization==
==Localization==
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!Compartment!!Description!!Evidence!!Notes
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===Notes===
===Notes===


==Structure and Physical Properties==
==Structure and Physical Properties==
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===Physical Properties===
<span id="Sequence"></span><big>'''Physical Properties'''</big>
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!{{table heading style}} |Sequence
!{{table heading style}} |Sequence
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|
[http://biocyc.org/ECOLI/sequence-aa?object=RRLH-RRNA at EcoCyc]  
[http://biocyc.org/ECOLI/sequence-rna?type=GENERIC-RNA&object=RRLH-RRNA at EcoCyc]
<pre></pre>
|-
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!{{table heading style}} |Mol. Wt
!{{table heading style}} |Mol. Wt
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===Domains/Motifs/Modification Sites===
 
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<big>'''Domains/Motifs/Modification Sites'''</big>
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===Structure===


<span id="Structure"></span><big>'''Structure'''</big>
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!Structure Type!!Organism!!Accession!!Residues covered!!Notes
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==Gene Product Resources==
==Gene Product Resources==
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===Notes===
===Notes===


==Accessions in Other Databases==
==Accessions in Other Databases==
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==Links==
==Links==
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==References==
==References==
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<references/>
<references/>
__NOTOC__
__NOTOC__
[[Category:GO:0016072]][[Category:GO:0009281]][[Category:GO:0006412]][[Category:GO:0005737]]</noinclude>
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Revision as of 06:40, 28 July 2007

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

23S rRNA

Synonyms

23S rRNA (rrlH) product[1], 23S rRNA (rrlG) product[1], 23S rRNA (rrlD) product[1], 23S rRNA (rrlC) product[1], 23S rRNA (rrlA) product[1], 23S rRNA (rrlB) product[1], 23S rRNA (rrlE) product[1], rrlH product[2][1], rrnH product[2][1]

Product description

rrlH 23S ribosomal RNA[2][3];

Component of ; 50S ribosomal subunit[3]

EC number (for enzymes)
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Notes

Function

[back to top]


Gene Ontology

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status

GO:0016072

rRNA metabolic process

P

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0009281

cytosolic ribosome (sensu Bacteria)

C

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0006412

translation

P

Seeded from EcoCyc 11.1[3].

required fields missing

GO:0005737

cytoplasm

C

Seeded from EcoCyc 11.1[3].

required fields missing

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See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Interactions

Partner Type Partner Notes

Protein

Subunits of 50S ribosomal subunit

could be indirect

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Notes

Localization

Compartment Description Evidence Notes
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Notes

Structure and Physical Properties

[back to top]


Physical Properties

Sequence

at EcoCyc

Mol. Wt
pI
Extinction coefficient
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Domains/Motifs/Modification Sites

Type Residues Description Notes
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Structure

Structure Type Organism Accession Residues covered Notes
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Notes

Gene Product Resources

[back to top]


Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:RRLH-RRNA

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Notes

Links

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Name URL Comments
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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 3.4 3.5 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7


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