fkpA:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3334, b3347, JW3309, yzzS''<ref name='LIB:Riley_2006'/>
''ECK3334, b3347, JW3309, yzzS''<ref name='LIB:Riley_2006'/>, yzzS''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)<ref name='LIB:Riley_2006'/>, B3347<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YzzS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FkpA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)<ref name='LIB:Riley_2006'/>, B3347<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YzzS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FkpA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3334, JW3309, yzzS, b3347''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=fkpA&s=search PortEco search(fkpA)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=fkpA&loc=MG1655:3475441..3474629,W3110:4162997..4163809,REL606:3405324..3404512,DH10B:3573186..3572374,BW2952:3361786..3362598 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3361786&end=3362598&gene=fkpA&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fkpA+AND+escherichia+coli Pubmed(fkpA)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=fkpA Textpresso(fkpA)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=fkpA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7716]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120004261&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=fkpA&loc=MG1655%3A3475441..3474629,W3110%3A4162997..4163809,REL606%3A3405324..3404512,DH10B%3A3573186..3572374,BW2952%3A3361786..3362598]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3361786&end=3362598&gene=fkpA&aa=mkslfkvtllattmavalhapitfaaeaakpataadskaafknddqksayalgaslgrymenslkeqeklgikldkdqliagvqdafadksklsdqeieqtlqafearvkssaqakmekdaadneakgkeyrekfakekgvktsstglvyqvveagkgeapkdsdtvvvnykgtlidgkefdnsytrgeplsfrldgvipgwteglknikkggkiklvippelaygkagvpgippnstlvfdvelldvkpapkadakpeadakaadsakk]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fkpA+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=fkpA]]&nbsp;&nbsp;


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Latest revision as of 21:50, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

fkpA

Gene Synonym(s)

ECK3334, b3347, JW3309, yzzS[1], yzzS

Product Desc.

peptidyl-prolyl cis-trans isomerase; in protein folding[2][3]

Periplasmic peptidylprolyl cis,trans isomerase; heat shock inducible; PPIase-independent chaperone activity, binds FK506[4]

Product Synonyms(s)

FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)[1], B3347[2][1], YzzS[2][1], FkpA[2][1] , ECK3334, JW3309, yzzS, b3347

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): fkpA[2]

Regulation/Activity
Quick Links



        

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Notes

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An fkpA, surA, ppiB, ppiD quadruple mutant is viable. FkpB is required for colicin M toxicity (Hullman, 2008).[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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