rplY:Quickview: Difference between revisions

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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2179, b2185, JW2173''<ref name='LIB:Riley_2006'/>
''ECK2179, b2185, JW2173''<ref name='LIB:Riley_2006'/>, JW2173''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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50S ribosomal subunit protein L25<ref name='LIB:Riley_2006'/>, B2185<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RplY<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''50S ribosomal subunit protein L25<ref name='LIB:Riley_2006'/>, B2185<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RplY<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2179, JW2173, b2185''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=rplY&s=search PortEco search(rplY)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=rplY&loc=MG1655:2280539..2280823,W3110:2285851..2286135,DH10B:2371527..2371811,REL606:2233705..2233989,BW2952:2166344..2166628 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2166344&end=2166628&gene=rplY&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rplY+AND+escherichia+coli Pubmed(rplY)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rplY Textpresso(rplY)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=rplY&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10885]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000876&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=rplY&loc=MG1655%3A2280539..2280823,W3110%3A2285851..2286135,DH10B%3A2371527..2371811,REL606%3A2233705..2233989,BW2952%3A2166344..2166628]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2166344&end=2166628&gene=rplY&aa=mftinaevrkeqgkgasrrlraankfpaiiyggkeaplaieldhdkvmnmqakaefysevltivvdgkeikvkaqdvqrhpykpklqhidfvra]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rplY+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=rplY]]&nbsp;&nbsp;


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Latest revision as of 21:46, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

rplY

Gene Synonym(s)

ECK2179, b2185, JW2173[1], JW2173

Product Desc.

50S ribosomal subunit protein L25[2][3];

Component of 50S ribosomal subunit[3]; ribosome[2][3]

50S ribosomal subunit protein L25; 5S rRNA-binding [4]

Product Synonyms(s)

50S ribosomal subunit protein L25[1], B2185[2][1], RplY[2][1] , ECK2179, JW2173, b2185

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): rplY[2]

Regulation/Activity
Quick Links



        

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See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


rplY is a non-essential gene as judged by the ability to recombineer haploid deletions (Baba, 2006; Korepanov, 2006). Mutants lacking RplY grow slowly and have reduced protein synthesis, possibly due to a problem with ribosome recycling (Korepanov, 2006).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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