lfhA:Gene Product(s): Difference between revisions
imported>Wikientrybot Refreshing information from GenBank record NC_000913 |
imported>Wikientrybot Refreshing information from GenBank record NC_000913 |
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[http://www.ncbi.nlm.nih.gov/protein/ GeneID:944908] | [http://www.ncbi.nlm.nih.gov/protein/ GeneID:944908] | ||
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Escherichia coli str. K-12 substr. MG1655 | |||
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[http://www.pir.uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]]) | |||
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[http://www.uniprot.org/uniprot/Q47153 UniProtKB/Swiss-Prot:Q47153] | |||
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Escherichia coli str. K-12 substr. MG1655 | |||
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[http://ecogene.org EcoGene] ([[EcoGene|EcoliWiki Page]]) | |||
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[http://ecogene.org/geneinfo.php?eg_id=EG13144 EcoGene:EG13144] | |||
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Escherichia coli str. K-12 substr. MG1655 | |||
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[http://www.ncbi.nlm.nih.gov/gene NCBI (Gene)] ([[NCBI (Gene)|EcoliWiki Page]]) | |||
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[http://www.ncbi.nlm.nih.gov/gene?term=944908 GeneID:944908] | |||
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Escherichia coli str. K-12 substr. MG1655 | Escherichia coli str. K-12 substr. MG1655 | ||
Revision as of 20:59, 28 September 2011
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
| Standard name |
FhiA |
|---|---|
| Synonyms |
B0229[1], FhiA[1], LfhA[2][1] , ECK0230, fhiA, JW5811, b0229 |
| Product description | |
| EC number (for enzymes) |
|
| edit table |
Notes
Function
Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0005886 |
plasma membrane |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
C |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0005886 |
plasma membrane |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
C |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0006810 |
transport |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0009306 |
protein secretion |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0015031 |
protein transport |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
P |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0016020 |
membrane |
GOA:interpro |
IEA: Inferred from Electronic Annotation |
C |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0016020 |
membrane |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
C |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0016021 |
integral to membrane |
GOA:spkw |
IEA: Inferred from Electronic Annotation |
C |
Seeded from EcoCyc (v14.0) |
complete | ||
| GO:0016021 |
integral to membrane |
IEA: Inferred from Electronic Annotation |
SP_SL:SL-9909 |
C |
Seeded from EcoCyc (v14.0) |
complete | ||
| edit table |
Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
| edit table |
Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
| Compartment | Description | Evidence | Reference/Source | Notes |
|---|---|---|---|---|
| edit table |
Notes
Structure and Physical Properties
Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
| Name | |
|---|---|
| Sequence |
MLSRSDLLTL LTINFIVVTK GAERISEVSA RFTLDAMPGK QMAIDADLNA GLINQAQAQT RRKDVASEAD FYGAMDGASK FVRGDAIAGM MILAINLIGG VCIGIFKYNL SADAAFQQYV LMTIGDGLVA QIPSLLLSTA AAIIVTRVSD NGDIAHDVRN QLLASPSVLY TATGIMFVLA VVPGMPHLPF LLFSALLGFT GWRMSKQPLA AEAEEKSLET LTRTITETSE QQVSWETIPL IEPISLSLGY KLVALVDKAQ GNPLTQRIRG VRQVISDGNG VLLPEIRIRE NFRLKPSQYA IFINGIKADE ADIPADKLMA LPSSETYGEI DGVQGNDPAY GMPVTWIQAA QKAKALNMGY QVIDSASVIA THVNKIVRSY IPDLFNYDDI TQLHNRLSST APRLAEDLSA ALNYSQLLKV YRALLTEGVS LRDIVTIATV LVASSTVTKD HILLAADVRL ALRRSITHPF VRKQELTVYT LNNELENLLT NVVNQAQQGG KVMLDSVPVD PNMLNQFQST MPQVKEQMKA AGKDPVLLVP PQLRPLLARY ARLFAPGLHV LSYNEVPDEL ELKIMGALM |
| Length |
579 |
| Mol. Wt |
63.154 kDa |
| pI |
6.0 (calculated) |
| Extinction coefficient |
40,340 - 40,465 (calc based on 16 Y, 3 W, and 1 C residues) |
| edit table |
Domains/Motifs/Modification Sites
|
See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
|
<motif_map/> |
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Structure
|
Structure figures
Notes
Gene Product Resources
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
|
Escherichia coli str. K-12 substr. MG1655 | ||
| edit table |
Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 2.0 2.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ Finn, RD et al. (2010) The Pfam protein families database. Nucleic Acids Res. 38 D211-22 PubMed
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