Plasmid F traJ:Gene Product(s): Difference between revisions

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!|Compartment!!Description!!Evidence!!Source!!Notes
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!align=left {{table heading style}} |Length
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229
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!align=left {{table heading style}} |Mol. Wt
!align=left {{table heading style}} |Mol. Wt
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27.062 kDa
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!align=left {{table heading style}} |pI
!align=left {{table heading style}} |pI
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6.9 (calculated)
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!align=left {{table heading style}} |Extinction coefficient
!align=left {{table heading style}} |Extinction coefficient
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35,870 - 36,495 (calc based on 13 Y, 3 W, and 5 C residues)


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Revision as of 03:05, 25 August 2011

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

traJ

Synonyms

traJ, Fpla074

Product description

traJ

this activator promotes transcription initiation upstream of the traY gene in the transfer operon

EC number (for enzymes)


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Notes

Function

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Gene Ontology See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0005737

cytoplasm

PMID:3514611[1]

IDA: Inferred from Direct Assay

C

complete

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Interactions

<protect> See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

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Compartment Description Evidence Reference/Source Notes
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Notes

Structure and Physical Properties

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Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Name
Sequence 
MYPMDRIQQK HARQIDLLEN LTAVIQDYPN PACIRDETGK FIFCNTLFHE SFLTQDQSAE
KWLLSQRDFC ELISVTEMEA YRNEHTHLNL VEDVFIQNRF WTISVQSFLN GHRNIILWQF
YDAAHVRHKD SYNQKTIVSD DIRNIIRRMS DDSSVSSYVN DVFYLYSTGI SHNAIARILN
ISISTSKKHA SLICDYFSVS NKDELIILLY NKKFIYYLYE KAMCIINTR
Length

229

Mol. Wt

27.062 kDa

pI

6.9 (calculated)

Extinction coefficient

35,870 - 36,495 (calc based on 13 Y, 3 W, and 5 C residues)

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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes References
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<motif_map/>

Structure
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Structures

<beststructure> gene=Plasmid_F_traJ taxon=2465 </beststructure>

Models

View models at:

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Structure figures

Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes
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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ Cuozzo, M & Silverman, PM (1986) Characterization of the F plasmid TraJ protein synthesized in F' and Hfr strains of Escherichia coli K-12. J. Biol. Chem. 261 5175-9 PubMed

Categories

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