yagP:Gene Product(s): Difference between revisions
touch |
Updating product models |
||
| Line 287: | Line 287: | ||
|| | || | ||
View models at: | View models at: | ||
* [http:// | * [http://www.proteinmodelportal.org/query/uniprot/P75684 Protein Model Portal] | ||
* [http://bioinf.cs.ucl.ac.uk/psipred/ PSI-PRED] | * [http://bioinf.cs.ucl.ac.uk/psipred/ PSI-PRED] | ||
* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP) | * [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP) | ||
Revision as of 17:04, 17 August 2011
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| Nomenclature | Function | Interactions | Localization | Sequence | Domains | Structure | Resources | Accessions | Links | References | Suggestions |
Nomenclature
See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.
| Standard name |
YagP |
|---|---|
| Synonyms |
predicted transcriptional regulator[1], B0282[2][1], YagP[2][1] |
| Product description |
predicted transcriptional regulator LYSR-type[2][3] Function unknown[4] |
| EC number (for enzymes) |
|
| edit table |
Notes
Function
Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| edit table |
Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.
| Partner Type | Partner | Notes | References | Evidence |
|---|---|---|---|---|
|
Protein |
intB |
Experiment(s):EBI-1136101 | ||
|
Protein |
dnaK |
Experiment(s):EBI-1136101 | ||
|
Protein |
nrdB |
Experiment(s):EBI-1136101 | ||
|
Protein |
groL |
Experiment(s):EBI-1136101 | ||
|
Protein |
glcC |
Experiment(s):EBI-1136101 | ||
|
Protein |
slyD |
Experiment(s):EBI-1136101 | ||
| edit table |
Notes
Localization
See Help:Product_localization for how to add or edit information in this section of EcoliWiki.
| Compartment | Description | Evidence | Source | Notes |
|---|---|---|---|---|
| edit table |
Notes
Structure and Physical Properties
Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.
| Name | |
|---|---|
| Sequence |
MPAPVVLILA AGRGECFLAS GGNTHKCIGW RQSPEVAPYR WPFEENGRTF DLAIEPQITT NDLRLMLRLA LAGGGITIAT QETFRPYIES GKLVSLLDDF LPQFPGFYLY FPQRRNIAPK LRALIDYVKE WRQQLA |
| Length | |
| Mol. Wt | |
| pI | |
| Extinction coefficient |
|
| edit table |
Domains/Motifs/Modification Sites
|
See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.
|
<motif_map/> |
|
Structure
|
Structure figures
Notes
Gene Product Resources
See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.
| Resource type | Source | Notes/Reference |
|---|---|---|
| edit table |
Notes
Accessions in Other Databases
See Help:Gene_accessions for help with entering information into the Gene Accessions table.
| Database | Accession | Notes |
|---|---|---|
|
| ||
| edit table |
Notes
Links
| Name | URL | Comments |
|---|---|---|
| edit table |
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 5.0 5.1 5.2 5.3 5.4 5.5 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed
Categories