dxs:Evolution: Difference between revisions

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!|Database!!Accession!!Notes
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00676 PF00676  Dehydrogenase E1 component]
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[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11624:SF20 PTHR11624:SF20]
[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11624:SF20 PTHR11624:SF20]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00676 PF00676  Dehydrogenase E1 component] 
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Revision as of 21:59, 15 August 2011

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT4G15560 (score: 1.000; bootstrap: 100%)
  • AT3G21500 (score: 0.544)
  • AT5G11380 (score: 0.202)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0229442 (score: 1.000; bootstrap: 100%)
  • DDB0230185 (score: 0.245)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA11252-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q6I573 (score: 1.000; bootstrap: 100%)
  • Q5TKB6 (score: 0.993)
  • O22567 (score: 0.728)
  • Q6YU51 (score: 0.566)
  • Q58I00 (score: 0.431)
  • Q58I01 (score: 0.135)
  • Q5VSB8 (score: 0.104)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YBR221C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC30D103c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

DXS

From SHIGELLACYC

E. coli O157

DXS

From ECOO157CYC


Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00676 Dehydrogenase E1 component

Pfam (EcoliWiki Page)

PF02779 Transketolase, pyrimidine binding domain

Pfam (EcoliWiki Page)

PF02780 Transketolase, C-terminal domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:52518

Superfamily (EcoliWiki Page)

SUPERFAMILY:52518

Superfamily (EcoliWiki Page)

SUPERFAMILY:52922

Panther (EcoliWiki Page)

PTHR11624:SF20



Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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