dxs:Evolution

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Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT4G15560 (score: 1.000; bootstrap: 100%)
  • AT3G21500 (score: 0.544)
  • AT5G11380 (score: 0.202)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0229442 (score: 1.000; bootstrap: 100%)
  • DDB0230185 (score: 0.245)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA11252-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q6I573 (score: 1.000; bootstrap: 100%)
  • Q5TKB6 (score: 0.993)
  • O22567 (score: 0.728)
  • Q6YU51 (score: 0.566)
  • Q58I00 (score: 0.431)
  • Q58I01 (score: 0.135)
  • Q5VSB8 (score: 0.104)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YBR221C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC30D103c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

DXS

From SHIGELLACYC

E. coli O157

DXS

From ECOO157CYC


Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00676 Dehydrogenase E1 component

Pfam (EcoliWiki Page)

PF02779 Transketolase, pyrimidine binding domain

Pfam (EcoliWiki Page)

PF02780 Transketolase, C-terminal domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:52518

Superfamily (EcoliWiki Page)

SUPERFAMILY:52518

Superfamily (EcoliWiki Page)

SUPERFAMILY:52922

Panther (EcoliWiki Page)

PTHR11624:SF20

EcoCyc

EcoCyc:G6237

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13612

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002848

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3378

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0001461

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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Categories

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