spoT:Quickview: Difference between revisions
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!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
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[http://porteco.org/AjaxSearch.jsp?searchString=spoT&s=search PortEco search(spoT)] [http://ecoliwiki.net/tools/display_dna.php?gene=spoT&loc=MG1655:3820423..3822531,W3110:3818015..3815907,REL606:3760757..3762865,DH10B:3918001..3920115,BW2952:3708750..3710864 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3708750&end=3710864&gene=spoT&aa=mylfeslnqliqtylpedqikrlrqaylvardahegqtrssgepyithpvavacilaemkldyetlmaallhdviedtpatyqdmeqlfgksvaelvegvskldklkfrdkkeaqaenfrkmimamvqdirvilikladrthnmrtlgslrpdkrrriaretleiysplahrlgihhikteleelgfealypnryrvikevvkaargnrkemiqkilseiegrlqeagipcrvsgrekhlysiyckmvlkeqrfhsimdiyafrvivndsdtcyrvlgqmhslykprpgrvkdyiaipkangyqslhtsmigphgvpvevqirtedmdqmaemgvaahwaykehgetsttaqiraqrwmqsllelqqsagssfefiesvksdlfpdeiyvftpegrivelpagatpvdfayavhtdighacvgarvdrqpyplsqpltsgqtveiitapgarpnaawlnfvvsskarakirqllknlkrddsvslgrrllnhalggsrklneipqeniqreldrmklatlddllaeiglgnamsvvvaknlqhgdasippatqshghlpikgadgvlitfakccrpipgdpiiahvspgkglvihhescrnirgyqkepekfmavewdketaqefiteikvemfnhqgalanltaaintttsniqslnteekdgrvysafirltardrvhlanimrkirvmpdvikvtrnrn Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=spoT+AND+escherichia+coli Pubmed(spoT)] [http:// | [http://porteco.org/AjaxSearch.jsp?searchString=spoT&s=search PortEco search(spoT)] [http://ecoliwiki.net/tools/display_dna.php?gene=spoT&loc=MG1655:3820423..3822531,W3110:3818015..3815907,REL606:3760757..3762865,DH10B:3918001..3920115,BW2952:3708750..3710864 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3708750&end=3710864&gene=spoT&aa=mylfeslnqliqtylpedqikrlrqaylvardahegqtrssgepyithpvavacilaemkldyetlmaallhdviedtpatyqdmeqlfgksvaelvegvskldklkfrdkkeaqaenfrkmimamvqdirvilikladrthnmrtlgslrpdkrrriaretleiysplahrlgihhikteleelgfealypnryrvikevvkaargnrkemiqkilseiegrlqeagipcrvsgrekhlysiyckmvlkeqrfhsimdiyafrvivndsdtcyrvlgqmhslykprpgrvkdyiaipkangyqslhtsmigphgvpvevqirtedmdqmaemgvaahwaykehgetsttaqiraqrwmqsllelqqsagssfefiesvksdlfpdeiyvftpegrivelpagatpvdfayavhtdighacvgarvdrqpyplsqpltsgqtveiitapgarpnaawlnfvvsskarakirqllknlkrddsvslgrrllnhalggsrklneipqeniqreldrmklatlddllaeiglgnamsvvvaknlqhgdasippatqshghlpikgadgvlitfakccrpipgdpiiahvspgkglvihhescrnirgyqkepekfmavewdketaqefiteikvemfnhqgalanltaaintttsniqslnteekdgrvysafirltardrvhlanimrkirvmpdvikvtrnrn Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=spoT+AND+escherichia+coli Pubmed(spoT)] [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=spoT Textpresso(spoT)] | ||
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Revision as of 18:29, 27 June 2011
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
spoT |
|---|---|
| Gene Synonym(s) |
ECK3640, b3650, JW3625[1] |
| Product Desc. |
Guanosine 5'-diphosphate, 3'-diphosphate pyrophosphatase; ppGpp synthase II activity[4] |
| Product Synonyms(s) |
bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase[1], B3650[2][1], SpoT[2][1] |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): rpoZ-spoT-trmH-recG[2], rpoZ-spoTU-recG |
| Regulation/Activity | |
| Quick Links |
PortEco search(spoT) DNA display Protein display Pubmed(spoT) Textpresso(spoT) |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
cgtA mutants have elevated basal ppGpp and CgtA is proposed to be a regulator of SpoT activity (Jiang, 2007).[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.