thrS:Evolution: Difference between revisions

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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00587 PF00587  tRNA synthetase class II core domain (G, H, P, S and T)]   
[http://pfam.janelia.org/family/PF00587 PF00587  tRNA synthetase class II core domain (G, H, P, S and T)]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF07973 PF07973  Threonyl and Alanyl tRNA synthetase second additional domain]   
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Revision as of 19:30, 26 October 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000021424 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000026510 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT2G04842 (score: 1.000; bootstrap: 77%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000018947 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000010070 (score: 0.508)
  • ENSBTAP00000004948 (score: 0.296)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00026066 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00006617 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000015421 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000027835 (score: 0.518)
  • ENSCAFP00000017625 (score: 0.285)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000008915 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-041010-218 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-041010-218 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0231248 (score: 1.000; bootstrap: 100%)
  • DDB0231249 (score: 0.122)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0027081 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA18821-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000006337 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000005194 (score: 0.525)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000265112 (score: 1.000; bootstrap: 100%)
  • ENSP00000338093 (score: 0.612)
  • ENSP00000271635 (score: 0.311)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000021323 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000000380 (score: 0.400)
  • ENSMMUP00000008230 (score: 0.324)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000025526 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000014968 (score: 0.662)
  • ENSMODP00000023437 (score: 0.313)

From Inparanoid:20070104

Mus musculus

  • MGI:106314 (score: 1.000; bootstrap: 100%)
  • MGI:2444486 (score: 0.598)
  • MGI:1919057 (score: 0.316)

From Inparanoid:20070104

Oryza gramene

  • Q6ER90 (score: 1.000; bootstrap: 64%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000028765 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000012839 (score: 0.607)
  • ENSPTRP00000002129 (score: 0.266)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000025804 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000033052 (score: 0.593)
  • ENSRNOP00000042196 (score: 0.291)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YIL078W (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC25H22 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000175918 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000147450 (score: 0.648)
  • NEWSINFRUP00000131907 (score: 0.223)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00022436001 (score: 1.000; bootstrap: 100%)
  • GSTENP00029635001 (score: 0.433)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000009419 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

THRS

From SHIGELLACYC

E. coli O157

THRS

From ECOO157CYC


Do-It-Yourself Web Tools


Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF03129 Anticodon binding domain

Pfam (EcoliWiki Page)

PF02824 TGS domain

Panther (EcoliWiki Page)

PTHR11451:SF5

Superfamily (EcoliWiki Page)

SUPERFAMILY:52954

Superfamily (EcoliWiki Page)

SUPERFAMILY:55186

Superfamily (EcoliWiki Page)

SUPERFAMILY:55681

Superfamily (EcoliWiki Page)

SUPERFAMILY:81271

Pfam (EcoliWiki Page)

PF00587 tRNA synthetase class II core domain (G, H, P, S and T)

Pfam (EcoliWiki Page)

PF07973 Threonyl and Alanyl tRNA synthetase second additional domain



Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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