exbD:Gene Product(s)

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Gene Product(s)

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Nomenclature

Function

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Localization

Sequence

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Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name	ExbD
Synonyms	membrane spanning protein in TonB-ExbB-ExbD complex, B3005, ExbD
Product description	ExbD uptake of enterochelin; tonB-dependent uptake of B colicins; Component of TonB energy transducing system; Outer Membrane Ferric Citrate Transport System; Outer Membrane Ferrichrome Transport System; Outer Membrane Ferric Enterobactin Transport System; vitamin B12 outer membrane transport complex; ferric dicitrate uptake system; ferrichrome uptake system; Ferric Enterobactin Transport System; vitamin B12 transport system Uptake of enterochelin; resistance or sensitivity to colicins; similarity with TolR
EC number (for enzymes)
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Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier	GO ID	GO term name	Reference(s)	Evidence Code	with/from	Aspect	Notes	Status
	GO:0005215	transporter activity	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR003400	F	Seeded from EcoCyc (v14.0)	complete
	GO:0005886	plasma membrane	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0997	C	Seeded from EcoCyc (v14.0)	complete
	GO:0005886	plasma membrane	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-1003	C	Seeded from EcoCyc (v14.0)	complete
	GO:0006810	transport	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR003400	P	Seeded from EcoCyc (v14.0)	complete
	GO:0006810	transport	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0813	P	Seeded from EcoCyc (v14.0)	complete
	GO:0015031	protein transport	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0653	P	Seeded from EcoCyc (v14.0)	complete
	GO:0016020	membrane	GOA:interpro GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR003400	C	Seeded from EcoCyc (v14.0)	complete
	GO:0016020	membrane	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0472	C	Seeded from EcoCyc (v14.0)	complete
	GO:0016021	integral to membrane	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0812	C	Seeded from EcoCyc (v14.0)	complete
	GO:0016021	integral to membrane	GO_REF:0000023	IEA: Inferred from Electronic Annotation	SP_SL:SL-9906	C	Seeded from EcoCyc (v14.0)	complete
	GO:0043213	bacteriocin transport	GOA:spkw SP_KW:GO_REF:0000004	IEA: Inferred from Electronic Annotation	SP_KW:KW-0080	P	Seeded from EcoCyc (v14.0)	complete
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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type	Partner	Notes	References	Evidence
Protein	Subunits of TonB energy transducing system	could be indirect
Protein	Subunits of Outer Membrane Ferric Citrate Transport System	could be indirect
Protein	Subunits of Outer Membrane Ferrichrome Transport System	could be indirect
Protein	Subunits of Outer Membrane Ferric Enterobactin Transport System	could be indirect
Protein	Subunits of vitamin B12 outer membrane transport complex	could be indirect
Protein	Subunits of ferric dicitrate uptake system	could be indirect
Protein	Subunits of ferrichrome uptake system	could be indirect
Protein	Subunits of Ferric Enterobactin Transport System	could be indirect
Protein	Subunits of vitamin B12 transport system	could be indirect
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Localization

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Compartment	Description	Evidence	Source	Notes
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Structure and Physical Properties

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Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Sequence	at EcoCyc MAMHLNENLD DNGEMHDINV TPFIDVMLVL LIIFMVAAPL ATVDVKVNLP ASTSTPQPRP EKPVYLSVKA DNSMFIGNDP VTDETMITAL NALTEGKKDT TIFFRADKTV DYETLMKVMD TLHQAGYLKI GLVGEETAKA K
Length	141
Mol. Wt	15.526 kDa
pI	4.6 (calculated)
Extinction coefficient	4,470 (calc based on 3 Y, W, and C residues)
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Domains/Motifs/Modification Sites

See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki. Type Residues Description Notes References Domain 11..137 PF02472 Biopolymer transport protein ExbD/TolR PMID:19920124 edit table

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Structure See Help:Product_structure for help entering or editing information in this section of EcoliWiki. Structures <beststructure> gene=exbD taxon=562,83333 </beststructure> Models View models at: EcoliPredict ModBase PSI-PRED Protein Quaternary Structure (PQS) Genomes TO Protein (GTOP) edit table

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type	Source	Notes/Reference
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Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database	Accession	Notes
EcoCyc (EcoliWiki Page)	EcoCyc:EG10272-MONOMER
UniProt (EcoliWiki Page)	UniProt:P0ABV2
PFAM (EcoliWiki Page)	Pfam:P0ABV2
RefSeq (EcoliWiki Page)	RefSeq:NP_417478
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Links

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Name	URL	Comments
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References

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Categories

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