Cis Element:DARS2: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
Update TableEdit tables.
/Volumes/r3/t3/ul/working/touchTables/touch_all_tables.php
Line 8: Line 8:
*  
*  
****************************************************************************************** -->
****************************************************************************************** -->
{| id="O4a75ba0c7d92f"  class=" tableEdit Cis_element_summary_table"   
{|   id="O4a75ba0c7d92f"  class=" tableEdit Cis_element_summary_table"   


|-
|-
!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
||
||
DARS2
DARS2
|-
|-
!align=left |Synonyms
!align=left {{table_heading_style}} |Synonyms
||
||


|-
|-
!align=left |Function
!align=left {{table_heading_style}} |Function
||
||
Recycling DnaA protein
Recycling DnaA protein
|-
|-
!align=left |Location
!align=left {{table_heading_style}} |Location
||
||


|-
|-
!align=left |SO terms
!align=left {{table_heading_style}} |SO terms
||
||


Line 48: Line 48:
****************************************************************************************** -->{{Gene_location_help}}
****************************************************************************************** -->{{Gene_location_help}}
{|  id="Z4a75ba0c7f1d0"  class=" tableEdit Gene_location_table"   
{|  id="Z4a75ba0c7f1d0"  class=" tableEdit Gene_location_table"   
|-
|- {{table_heading_style}}
!|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
!|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links


Line 67: Line 67:
*  
*  
****************************************************************************************** -->{{Product_interactions_help}}
****************************************************************************************** -->{{Product_interactions_help}}
{|  id="H4a75ba0c80380"  class=" tableEdit Product_interactions_table"   
{|  id="H4a75ba0c80380"  class=" tableEdit Product_interactions_table dataTable"   
|-
|- {{table heading style}}
!|Partner Type!!Partner!!Notes!!References!!Evidence
!|Partner Type!!Partner!!Notes!!References!!Evidence


Line 88: Line 88:
****************************************************************************************** -->
****************************************************************************************** -->
{|  id="K4a75ba0c81729"  class=" tableEdit Cis_Element_allele_table"   
{|  id="K4a75ba0c81729"  class=" tableEdit Cis_Element_allele_table"   
|-
|- {{table_heading_style}}
!|Allele!!Nt change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
!|Allele!!Nt change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments


Line 108: Line 108:
****************************************************************************************** -->{{Gene_resources_help}}
****************************************************************************************** -->{{Gene_resources_help}}
{|  id="F4a75ba0c829e3"  class=" tableEdit Gene_resource_table"   
{|  id="F4a75ba0c829e3"  class=" tableEdit Gene_resource_table"   
|-
|- {{table_heading_style}}
!|Resource!!Resource Type!!Source!!Notes/Reference
!|Resource!!Resource Type!!Source!!Notes/Reference


Line 127: Line 127:
****************************************************************************************** -->{{Gene_accessions_help}}
****************************************************************************************** -->{{Gene_accessions_help}}
{|  id="I4a75ba0c83c42"  class=" tableEdit Gene_accessions_table"   
{|  id="I4a75ba0c83c42"  class=" tableEdit Gene_accessions_table"   
|-
|- {{table_heading_style}}
!|Database!!Accession!!Notes
!|Database!!Accession!!Notes



Revision as of 16:35, 17 June 2010

Cis element summary table

Standard Name

DARS2

Synonyms
Function

Recycling DnaA protein

Location
SO terms


Notes

DARS = DnaA reactivating sequences[1]. DARS elements contain clusters of DnaA binding sites. Binding to DARS sites promotes nucleotide exchange, releasing ADP and allowing DnaA to bind ATP.


Location and Sequence

[back to top]


See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links


Notes

Interactions

[back to top]


See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence


Notes

Mutant alleles and phenotypes

[back to top]


Allele Nt change(s) Phenotype: Type Phenotype: Description Reference Availability Comments


Notes

Genetic Resources

[back to top]


See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference

Notes

Accessions

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes


Notes

References

[back to top]


See Help:References for how to manage references in EcoliWiki.

  1. ↑ Fujimitsu, K et al. (2009) Specific genomic sequences of E. coli promote replicational initiation by directly reactivating ADP-DnaA. Genes Dev. 23 1221-33 PubMed

Categories