aspA:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''aspA''  
''aspA''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK4133, b4139, JW4099''<ref name='LIB:Riley_2006'/>
''ECK4133, b4139, JW4099''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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AspA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
AspA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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L-Aspartate ammonia-lyase; L-aspartase<ref name='LIB:EcoGene'/>
L-Aspartate ammonia-lyase; L-aspartase<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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aspartate ammonia-lyase product<ref name='LIB:Riley_2006'/>, B4139 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AspA product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
aspartate ammonia-lyase product<ref name='LIB:Riley_2006'/>, B4139 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AspA product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
'''Cellular Component'''
* GO:0005624 membrane fraction ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0005739 mitochondrion ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0005829 cytosol ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:aspA-dcuA|aspA-dcuA]]<ref name='LIB:EcoCyc10.6'/>, OP00219, [[:Category:Txn_unit:aspA|aspA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:aspA-dcuA|aspA-dcuA]]<ref name='LIB:EcoCyc10.6'/>, OP00219, [[:Category:Txn_unit:aspA|aspA]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=aspA&loc=MG1655:4366350..4364914,W3110:4373007..4371571,REL606:4347048..4345612,DH10B:4466712..4465276 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4466712&end=4465276&gene=aspA&aa=mclkqiigslkkkvhmsnnirieedllgtrevpadayygvhtlraienfyisnnkisdipefvrgmvmvkkaaamankelqtipksvanaiiaacdevlnngkcmdqfpvdvyqggagtsvnmntnevlaniglelmghqkgeyqylnpndhvnkcqstndayptgfriavyssliklvdainqlregferkavefqdilkmgrtqlqdavpmtlgqefrafsillkeevkniqrtaelllevnlgataigtglntpkeysplavkklaevtgfpcvpaedlieatsdcgayvmvhgalkrlavkmskicndlrllssgpraglneinlpelqagssimpakvnpvvpevvnqvcfkvigndttvtmaaeagqlqlnvmepvigqamfesvhiltnacynllekcingitankevcegyvynsigivtylnpfighhngdivgkicaetgksvrevvlergllteaelddifsvqnlmhpaykakrytdeseq Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=aspA+AND+escherichia+coli Pubmed(aspA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=aspA Textpresso(aspA)]


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Revision as of 00:10, 22 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

aspA

Gene Synonym(s)

ECK4133, b4139, JW4099[1]

Product Desc.

AspA[2][3];

Component of aspartate ammonia-lyase[2][3]

L-Aspartate ammonia-lyase; L-aspartase[4]

Product Synonyms(s)

aspartate ammonia-lyase product[1], B4139 product[2][1], AspA product[2][1]

Function from GO

Molecular Function

Cellular Component

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): aspA-dcuA[2], OP00219, aspA[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(aspA)    Textpresso(aspA)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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Tetrameric enzyme. Repressed by nitrate via NarXL mediated repression.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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