aspC:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''aspC''  
''aspC''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0919, b0928, JW0911''<ref name='LIB:Riley_2006'/>
''ECK0919, b0928, JW0911''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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AspC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
AspC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Aspartate aminotransferase, AspAT; kynurenine aminotransferase; glutamine transaminase K<ref name='LIB:EcoGene'/>
Aspartate aminotransferase, AspAT; kynurenine aminotransferase; glutamine transaminase K<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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aspartate aminotransferase, PLP-dependent<ref name='LIB:Riley_2006'/>, B0928<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AspC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
aspartate aminotransferase, PLP-dependent<ref name='LIB:Riley_2006'/>, B0928<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AspC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0004069 aspartate transaminase activity ([http://www.geneontology.org/GO.evidence.shtml IMP,IDA])
* GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
* GO:0016212 kynurenine-oxoglutarate transaminase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0004838 tyrosine transaminase activity ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0030170 pyridoxal phosphate binding ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0006532 aspartate biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IMP,IGI])
* GO:0009094 L-phenylalanine biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IGI])
'''Cellular Component'''
* GO:0005829 cytosol ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0005737 cytoplasm ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:aspC|aspC]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:aspC|aspC]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=aspC&loc=MG1655:984932..983742,W3110:986131..984941,DH10B:1038860..1037670,REL606:1002801..1001611 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1002801&end=1001611&gene=aspC&aa=mfenitaapadpilgladlfraderpgkinlgigvykdetgktpvltsvkkaeqyllenettknylgidgipefgrctqellfgkgsalindkrartaqtpggtgalrvaadflakntsvkrvwvsnpswpnhksvfnsaglevreyayydaenhtldfdalinslneaqagdvvlfhgcchnptgidptleqwqtlaqlsvekgwlplfdfayqgfargleedaeglrafaamhkelivassysknfglynervgactlvaadsetvdrafsqmkaairanysnppahgasvvatilsndalraiweqeltdmrqriqrmrqlfvntlqekganrdfsfiikqngmfsfsgltkeqvlrlreefgvyavasgrvnvagmtpdnmaplceaivavl Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=aspC+AND+escherichia+coli Pubmed(aspC)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=aspC Textpresso(aspC)]


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Revision as of 00:10, 22 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

aspC

Gene Synonym(s)

ECK0919, b0928, JW0911[1]

Product Desc.

AspC[2][3];

Component of aspartate transaminase[2]; aspartate aminotransferase, PLP-dependent[3]

Aspartate aminotransferase, AspAT; kynurenine aminotransferase; glutamine transaminase K[4]

Product Synonyms(s)

aspartate aminotransferase, PLP-dependent[1], B0928[2][1], AspC[2][1]

Function from GO

Molecular Function

Biological Process

Cellular Component

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): aspC[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(aspC)    Textpresso(aspC)

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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