cspC:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''cspC'' | ''cspC'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1821, b1823, JW1812, msmB''<ref name='LIB:Riley_2006'/> | ''ECK1821, b1823, JW1812, msmB''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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stress protein, member of the CspA family<ref name='LIB:EcoCyc10.6'/>; stress protein, member of the CspA family; predicted DNA-binding transcriptional regulator<ref name='LIB:EcoCyc11.1'/> | stress protein, member of the CspA family<ref name='LIB:EcoCyc10.6'/>; stress protein, member of the CspA family; predicted DNA-binding transcriptional regulator<ref name='LIB:EcoCyc11.1'/> | ||
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Multicopy suppressor of mukB; cold shock protein homolog constitutively expressed at 37C; affects rpoS and uspA expression<ref name='LIB:EcoGene'/> | Multicopy suppressor of mukB; cold shock protein homolog constitutively expressed at 37C; affects rpoS and uspA expression<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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stress protein, member of the CspA-family<ref name='LIB:Riley_2006'/>, B1823<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MsmB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CspC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | stress protein, member of the CspA-family<ref name='LIB:Riley_2006'/>, B1823<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MsmB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CspC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0030401 transcription antiterminator activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Biological Process''' | |||
* GO:0060567 negative regulation of transcription termination ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:cspC|cspC]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:cspC|cspC]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=cspC&loc=MG1655:1905459..1905250,W3110:1909149..1908940,DH10B:1996030..1995821,REL606:1886014..1885805 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1886014&end=1885805&gene=cspC&aa=makikgqvkwfneskgfgfitpadgskdvfvhfsaiqgngfktlaegqnvefeiqdgqkgpaavnvtai Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=cspC+AND+escherichia+coli Pubmed(cspC)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=cspC Textpresso(cspC)] | |||
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Revision as of 00:06, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
cspC |
|---|---|
| Gene Synonym(s) |
ECK1821, b1823, JW1812, msmB[1] |
| Product Desc. |
stress protein, member of the CspA family[2]; stress protein, member of the CspA family; predicted DNA-binding transcriptional regulator[3] Multicopy suppressor of mukB; cold shock protein homolog constitutively expressed at 37C; affects rpoS and uspA expression[4] |
| Product Synonyms(s) |
stress protein, member of the CspA-family[1], B1823[2][1], MsmB[2][1], CspC[2][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
HT_Cmplx32_Mem: CspC+Hns+HupA.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.