dnaJ:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''dnaJ''  
''dnaJ''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0015, b0015, JW0014, groP, grpC''<ref name='LIB:Riley_2006'/>
''ECK0015, b0015, JW0014, groP, grpC''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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chaperone with DnaK; heat shock protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
chaperone with DnaK; heat shock protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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DnaK co-chaperone; stress-related DNA biosynthesis, responsive to heat shock; binds Zn(II)<ref name='LIB:EcoGene'/>
DnaK co-chaperone; stress-related DNA biosynthesis, responsive to heat shock; binds Zn(II)<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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chaperone Hsp40, co-chaperone with DnaK<ref name='LIB:Riley_2006'/>, B0015<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GrpC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GroP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DnaJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
chaperone Hsp40, co-chaperone with DnaK<ref name='LIB:Riley_2006'/>, B0015<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GrpC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GroP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DnaJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0003756 protein disulfide isomerase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0008270 zinc ion binding ([http://www.geneontology.org/GO.evidence.shtml IMP,IDA])
* GO:0051082 unfolded protein binding ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0042803 protein homodimerization activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0006457 protein folding ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0042026 protein refolding ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0006260 DNA replication ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0009408 response to heat ([http://www.geneontology.org/GO.evidence.shtml IEP])
'''Cellular Component'''
* GO:0005624 membrane fraction ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0005737 cytoplasm ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:dnaKJ|dnaKJ]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:dnaKJ|dnaKJ]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=dnaJ&loc=MG1655:14168..15298,W3110:14168..15298,DH10B:14168..15298,REL606:14166..15296 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=14166&end=15296&gene=dnaJ&aa=makqdyyeilgvsktaeereirkaykrlamkyhpdrnqgdkeaeakfkeikeayevltdsqkraaydqyghaafeqggmggggfgggadfsdifgdvfgdifgggrgrqraargadlrynmeltleeavrgvtkeiriptleecdvchgsgakpgtqpqtcptchgsgqvqmrqgffavqqtcphcqgrgtlikdpcnkchghgrversktlsvkipagvdtgdrirlagegeagehgapagdlyvqvqvkqhpiferegnnlycevpinfamaalggeievptldgrvklkvpgetqtgklfrmrgkgvksvrggaqgdllcrvvvetpvglnerqkqllqelqesfggptgehnsprsksffdgvkkffddltr Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dnaJ+AND+escherichia+coli Pubmed(dnaJ)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=dnaJ Textpresso(dnaJ)]


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Revision as of 00:03, 22 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

dnaJ

Gene Synonym(s)

ECK0015, b0015, JW0014, groP, grpC[1]

Product Desc.

chaperone with DnaK; heat shock protein[2][3];

Component of DnaJ/DnaK/GrpE[2][3]

DnaK co-chaperone; stress-related DNA biosynthesis, responsive to heat shock; binds Zn(II)[4]

Product Synonyms(s)

chaperone Hsp40, co-chaperone with DnaK[1], B0015[2][1], GrpC[2][1], GroP[2][1], DnaJ[2][1]

Function from GO

Molecular Function

Biological Process

Cellular Component

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): dnaKJ[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(dnaJ)    Textpresso(dnaJ)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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DnaK and DnaJ both bind to the same target peptide, forming a ternary complex.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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