fnr:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''fnr'' | ''fnr'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1330, b1334, JW1328, nirA, nirR, ossA, oxrA''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''ECK1330, b1334, JW1328, nirA, nirR, ossA, oxrA''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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FNR transcriptional dual regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | FNR transcriptional dual regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Global transcription factor for anaerobic growth; [4FE-4S] cluster; homodimeric<ref name='LIB:EcoGene'/> | Global transcription factor for anaerobic growth; [4FE-4S] cluster; homodimeric<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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DNA-binding transcriptional dual regulator, global regulator of anaerobic growth<ref name='LIB:Riley_2006'/>, B1334<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Fnr<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OssA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NirR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NirA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, transcriptional regulation of aerobic, anaerobic respiration, osmotic balance<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OxrA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth<ref name='LIB:Riley_2006'/>, B1334<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Fnr<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OssA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NirR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NirA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, transcriptional regulation of aerobic, anaerobic respiration, osmotic balance<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OxrA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:fnr|fnr]]<ref name='LIB:EcoCyc10.6'/>, OP00029 | transcription unit(s): [[:Category:Txn_unit:fnr|fnr]]<ref name='LIB:EcoCyc10.6'/>, OP00029 | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=fnr&loc=MG1655:1397550..1396798,W3110:1401240..1400488,DH10B:1486946..1486194,REL606:1396696..1395944 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1396696&end=1395944&gene=fnr&aa=mipekriirriqsggcaihcqdcsisqlcipftlneheldqldniierkkpiqkgqtlfkagdelkslyairsgtiksytiteqgdeqitgfhlagdlvgfdaigsghhpsfaqaletsmvceipfetlddlsgkmpnlrqqmmrlmsgeikgdqdmilllskknaeerlaafiynlsrrfaqrgfsprefrltmtrgdignylgltvetisrllgrfqksgmlavkgkyitienndalaqlaghtrnva Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fnr+AND+escherichia+coli Pubmed(fnr)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=fnr Textpresso(fnr)] | |||
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Revision as of 23:58, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
fnr |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
FNR transcriptional dual regulator[2][3] Global transcription factor for anaerobic growth; [4FE-4S] cluster; homodimeric[4] |
| Product Synonyms(s) |
DNA-binding transcriptional dual regulator, global regulator of anaerobic growth[1], B1334[2][1], Fnr[2][1], OssA[2][1], NirR[2][1], NirA[2][1], transcriptional regulation of aerobic, anaerobic respiration, osmotic balance[2][1], OxrA[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
FNR represses genes involved in aerobic respiration and activates genes required for anaerobic respiration.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.