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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''gapA''  
''gapA''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1777, b1779, JW1768, gad, gap1''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''ECK1777, b1779, JW1768, gad, gap1''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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glyceraldehyde 3-phosphate dehydrogenase-A<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
glyceraldehyde 3-phosphate dehydrogenase-A<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Glyceraldehyde 3-P dehydrogenase A; binds selenium<ref name='LIB:EcoGene'/>
Glyceraldehyde 3-P dehydrogenase A; binds selenium<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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glyceraldehyde-3-phosphate dehydrogenase A<ref name='LIB:Riley_2006'/>, B1779<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Gad<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GapA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Gap1<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
glyceraldehyde-3-phosphate dehydrogenase A<ref name='LIB:Riley_2006'/>, B1779<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Gad<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GapA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Gap1<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
'''Cellular Component'''
* GO:0005624 membrane fraction ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0005739 mitochondrion ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0005829 cytosol ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:gapA|gapA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:gapA|gapA]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=gapA&loc=MG1655:1860795..1861790,W3110:1864485..1865480,DH10B:1951366..1952361,REL606:1840000..1840995 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1840000&end=1840995&gene=gapA&aa=mtikvgingfgrigrivfraaqkrsdieivaindlldadymaymlkydsthgrfdgtvevkdghlivngkkirvtaerdpanlkwdevgvdvvaeatglfltdetarkhitagakkvvmtgpskdntpmfvkganfdkyagqdivsnascttnclaplakvindnfgiieglmttvhattatqktvdgpshkdwrggrgasqniipsstgaakavgkvlpelngkltgmafrvptpnvsvvdltvrlekaatyeqikaavkaaaegemkgvlgyteddvvstdfngevctsvfdakagialndnfvklvswydnetgysnkvldliahisk Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=gapA+AND+escherichia+coli Pubmed(gapA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=gapA Textpresso(gapA)]


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Revision as of 23:56, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

gapA

Gene Synonym(s)

ECK1777, b1779, JW1768, gad, gap1[1][2]

Product Desc.

glyceraldehyde 3-phosphate dehydrogenase-A[2][3];

Component of glyceraldehyde 3-phosphate dehydrogenase-A complex[2][3]

Glyceraldehyde 3-P dehydrogenase A; binds selenium[4]

Product Synonyms(s)

glyceraldehyde-3-phosphate dehydrogenase A[1], B1779[2][1], Gad[2][1], GapA[2][1], Gap1[2][1]

Function from GO

Molecular Function

Cellular Component

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): gapA[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(gapA)    Textpresso(gapA)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


A gapA mutant is not in the Keio collection; gapA mutants were not expected to grow on the medium used to attempt to isolate them; gapA is not an essential gene (Baba, 2006). Similar to eukaryotic GAPDH. Binds TrxA (Kumar, 2004).[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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