hslU:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''hslU''  
''hslU''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3923, b3931, JW3902, clpY, htpI''<ref name='LIB:Riley_2006'/>
''ECK3923, b3931, JW3902, clpY, htpI''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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ATPase component of the HslVU protease<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
ATPase component of the HslVU protease<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Heat-inducible ATP-dependent protease HslVU, ATPase subunit; involved in the degradation of misfolded proteins; heat shock protein D48.5<ref name='LIB:EcoGene'/>
Heat-inducible ATP-dependent protease HslVU, ATPase subunit; involved in the degradation of misfolded proteins; heat shock protein D48.5<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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molecular chaperone and ATPase component of HslUV protease<ref name='LIB:Riley_2006'/>, B3931<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HtpI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ClpY<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HslU<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, D48.5<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
molecular chaperone and ATPase component of HslUV protease<ref name='LIB:Riley_2006'/>, B3931<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HtpI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ClpY<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HslU<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, D48.5<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Cellular Component'''
* GO:0005624 membrane fraction ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0005739 mitochondrion ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0009408 response to heat ([http://www.geneontology.org/GO.evidence.shtml IEP])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:hslVU|hslVU]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:hslVU|hslVU]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=hslU&loc=MG1655:4119770..4118439,W3110:3514934..3516265,DH10B:4219467..4218136,REL606:4101230..4099899 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4101230&end=4099899&gene=hslU&aa=msemtpreivseldkhiigqdnakrsvaialrnrwrrmqlneelrhevtpknilmigptgvgkteiarrlaklanapfikveatkftevgyvgkevdsiirdltdaavkmvrvqaieknryraeelaeerildvlippaknnwgqteqqqepsaarqafrkklregqlddkeieidlaaapmgveimappgmeemtsqlqsmfqnlggqkqkarklkikdamkllieeeaaklvnpeelkqdaidaveqhgivfideidkickrgessgpdvsregvqrdllplvegctvstkhgmvktdhilfiasgafqiakpsdlipelqgrlpirvelqalttsdferiltepnasitvqykalmategvnieftdsgikriaeaawqvnestenigarrlhtvlerlmeeisydasdlsgqnitidadyvskhldalvadedlsrfil Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=hslU+AND+escherichia+coli Pubmed(hslU)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=hslU Textpresso(hslU)]


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Revision as of 23:51, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

hslU

Gene Synonym(s)

ECK3923, b3931, JW3902, clpY, htpI[1]

Product Desc.

ATPase component of the HslVU protease[2][3];

Component of HslU hexamer[3]; HslVU protease[3]

Heat-inducible ATP-dependent protease HslVU, ATPase subunit; involved in the degradation of misfolded proteins; heat shock protein D48.5[4]

Product Synonyms(s)

molecular chaperone and ATPase component of HslUV protease[1], B3931[2][1], HtpI[2][1], ClpY[2][1], HslU[2][1], D48.5[2][1]

Function from GO

Cellular Component

Biological Process

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): hslVU[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(hslU)    Textpresso(hslU)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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An hslU deletion suppresses dnaA46(Ts). Binds TrxA (Kumar, 2004).[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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