hyuA:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''hyuA''  
''hyuA''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2869, b2873, JW2841, ygeZ''<ref name='LIB:Riley_2006'/>
''ECK2869, b2873, JW2841, ygeZ''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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phenylhydantoinase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
phenylhydantoinase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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D-stereospecific phenylhydantoinase; physiological function unknown<ref name='LIB:EcoGene'/>
D-stereospecific phenylhydantoinase; physiological function unknown<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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D-stereospecific phenylhydantoinase<ref name='LIB:Riley_2006'/>, B2873<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgeZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HyuA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
D-stereospecific phenylhydantoinase<ref name='LIB:Riley_2006'/>, B2873<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgeZ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HyuA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Cellular Component'''
* GO:0005737 cytoplasm ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0006208 pyrimidine base catabolic process ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:hyuA|hyuA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:hyuA|hyuA]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=hyuA&loc=MG1655:3008050..3009435,W3110:3008684..3010069,DH10B:3101920..3103305,REL606:2895783..2897168 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2895783&end=2897168&gene=hyuA&aa=mefamrvlikngtvvnadgqakqdlliesgivrqlgnnispqlpyeeidatgcyvfpggvdvhthfnidvgiarscddfftgtraaacggtttiidhmgfgpngcrlrhqlevyrgyaahkavidysfhgviqhinhaildeipmiveeglssfklyltyqyklnddevlqalrrlhesgalttvhpendaaiaskraefiaagltapryhalsrpleceaeaiarminlaqiagnaplyivhlsnglgldylrlaranhqpvwvetcpqyllldersydtedgmkfilspplrnvreqdklwcgisdgaidvvatdhctfsmaqrlqiskgdfsrcpnglpgvenrmqllfssgvmtgritperfveltsamparlfglwpqkgllapgsdgdvviidprqsqqiqhrhlhdnadyspwegftcqgaivrtlsrgetifcdgtftgkagrgrflrrkpfvppvl Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=hyuA+AND+escherichia+coli Pubmed(hyuA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=hyuA Textpresso(hyuA)]


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Revision as of 23:50, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

hyuA

Gene Synonym(s)

ECK2869, b2873, JW2841, ygeZ[1]

Product Desc.

phenylhydantoinase[2][3];

Component of phenylhydantoinase[3]

D-stereospecific phenylhydantoinase; physiological function unknown[4]

Product Synonyms(s)

D-stereospecific phenylhydantoinase[1], B2873[2][1], YgeZ[2][1], HyuA[2][1]

Function from GO

Molecular Function

  • GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides (IDA)

Cellular Component

Biological Process

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): hyuA[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(hyuA)    Textpresso(hyuA)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


YgeZ is tetrameric. The upstream TTG may be utilized in vivo, although the ATG indicated here is a more likely in vivo start. The overexpressed, N-terminally sequenced protein was synthesized with an artificial RBS for the TTG start. Native protein N-terminus has not been determined. AFMB Structural Genomics target No. 92 (http://afmb.cnrs-mrs.fr/article171.html).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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