lpxA:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''lpxA''  
''lpxA''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0180, b0181, JW0176''<ref name='LIB:Riley_2006'/>
''ECK0180, b0181, JW0176''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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LpxA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
LpxA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Lipid A biosynthesis, UDP-N-acetylglucosamine acyltransferase<ref name='LIB:EcoGene'/>
Lipid A biosynthesis, UDP-N-acetylglucosamine acyltransferase<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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UDP-N-acetylglucosamine acyltransferase<ref name='LIB:Riley_2006'/>, B0181<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LpxA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
UDP-N-acetylglucosamine acyltransferase<ref name='LIB:Riley_2006'/>, B0181<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LpxA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0008780 acyl-(acyl-carrier-protein)-UDP-N-acetylglucosamine O-acyltransferase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0008415 acyltransferase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Cellular Component'''
* GO:0005737 cytoplasm ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:yaeT-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE|yaeT-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE]]<ref name='LIB:EcoCyc10.6'/>, ecfK-skp-lpxD-fabZ-lpxAB-rnhB-dnaE, [[:Category:Txn_unit:hlpA-lpxD-fabZ-lpxA|hlpA-lpxD-fabZ-lpxA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yaeT-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE|yaeT-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE]]<ref name='LIB:EcoCyc10.6'/>, ecfK-skp-lpxD-fabZ-lpxAB-rnhB-dnaE, [[:Category:Txn_unit:hlpA-lpxD-fabZ-lpxA|hlpA-lpxD-fabZ-lpxA]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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[[kegg:ko00540.html|LPS biosynthesis]]
[[kegg:ko00540.html|LPS biosynthesis]]
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=lpxA&loc=MG1655:202560..203348,W3110:202560..203348,DH10B:176664..177452,REL606:205402..206190 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=205402&end=206190&gene=lpxA&aa=midksafvhptaiveegasiganahigpfcivgphveigegtvlkshvvvnghtkigrdneiyqfasigevnqdlkyageptrveigdrnriresvtihrgtvqgggltkvgsdnllminahiahdctvgnrcilannatlaghvsvddfaiiggmtavhqfciigahvmvggcsgvaqdvppyviaqgnhatpfgvnieglkrrgfsreaitairnaykliyrsgktldevkpeiaelaetypevkaftdffarstrglir Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=lpxA+AND+escherichia+coli Pubmed(lpxA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=lpxA Textpresso(lpxA)]


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Revision as of 23:46, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

lpxA

Gene Synonym(s)

ECK0180, b0181, JW0176[1]

Product Desc.

LpxA[2][3];

Component of UDP-N-acetylglucosamine acyltransferase[2][3]

Lipid A biosynthesis, UDP-N-acetylglucosamine acyltransferase[4]

Product Synonyms(s)

UDP-N-acetylglucosamine acyltransferase[1], B0181[2][1], LpxA[2][1]

Function from GO

Molecular Function

  • GO:0008780 acyl-(acyl-carrier-protein)-UDP-N-acetylglucosamine O-acyltransferase activity (IDA)
  • GO:0008415 acyltransferase activity (IDA)

Cellular Component

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yaeT-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE[2], ecfK-skp-lpxD-fabZ-lpxAB-rnhB-dnaE, hlpA-lpxD-fabZ-lpxA[2]

Regulation/Activity

LPS biosynthesis

Quick Links

DNA display    Protein display    Pubmed(lpxA)    Textpresso(lpxA)

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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LpxA contains 24 hexapeptide repeats.[4]



References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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