marA:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''marA'' | ''marA'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1524, b1531, JW5249, cfxB, norB, soxQ, inaR, nfxC''<ref name='LIB:Riley_2006'/> | ''ECK1524, b1531, JW5249, cfxB, norB, soxQ, inaR, nfxC''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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MarA transcriptional activator<ref name='LIB:EcoCyc10.6'/>; MarA transcriptional dual regulator<ref name='LIB:EcoCyc11.1'/> | MarA transcriptional activator<ref name='LIB:EcoCyc10.6'/>; MarA transcriptional dual regulator<ref name='LIB:EcoCyc11.1'/> | ||
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Transcriptional activator for multiple antibiotic resistance; AraC family; resistance to tetracycline, chloramphenicol<ref name='LIB:EcoGene'/> | Transcriptional activator for multiple antibiotic resistance; AraC family; resistance to tetracycline, chloramphenicol<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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DNA-binding transcriptional dual activator of multiple antibiotic resistance<ref name='LIB:Riley_2006'/>, B1531<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CfxB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, InaR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NorB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SoxQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NfxC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MarA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | DNA-binding transcriptional dual activator of multiple antibiotic resistance<ref name='LIB:Riley_2006'/>, B1531<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CfxB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, InaR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NorB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SoxQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NfxC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MarA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:marRAB|marRAB]]<ref name='LIB:EcoCyc10.6'/>, OP00264 | transcription unit(s): [[:Category:Txn_unit:marRAB|marRAB]]<ref name='LIB:EcoCyc10.6'/>, OP00264 | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=marA&loc=MG1655:1617598..1617981,W3110:1621288..1621671,DH10B:1707223..1707606,REL606:1587340..1587723 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1587340&end=1587723&gene=marA&aa=mtmsrrntdaitihsildwiednlesplslekvsersgyskwhlqrmfkketghslgqyirsrkmteiaqklkesnepilylaerygfesqqtltrtfknyfdvpphkyrmtnmqgesrflhplnhyns Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=marA+AND+escherichia+coli Pubmed(marA)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=marA Textpresso(marA)] | |||
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Revision as of 23:45, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
marA |
|---|---|
| Gene Synonym(s) |
ECK1524, b1531, JW5249, cfxB, norB, soxQ, inaR, nfxC[1] |
| Product Desc. |
MarA transcriptional activator[2]; MarA transcriptional dual regulator[3] Transcriptional activator for multiple antibiotic resistance; AraC family; resistance to tetracycline, chloramphenicol[4] |
| Product Synonyms(s) |
DNA-binding transcriptional dual activator of multiple antibiotic resistance[1], B1531[2][1], CfxB[2][1], InaR[2][1], NorB[2][1], SoxQ[2][1], NfxC[2][1], MarA[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Martin (2002) provide some evidence in support of the this alternative ATG start: native protein is slightly smaller than the engineered protein by Western blot. The spacing to the GAGG RBS is bad for the first ATG and excellent for the second ATG. MarA is unstable.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.