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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''nuoC''  
''nuoC''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2280, b2286, JW5375, nuoCD, nuoD''<ref name='LIB:Riley_2006'/>
''ECK2280, b2286, JW5375, nuoCD, nuoD''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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NuoC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
NuoC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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NADH:ubiquinone oxidoreductase subunit C, complex I; NADH dehydrogenase I<ref name='LIB:EcoGene'/>
NADH:ubiquinone oxidoreductase subunit C, complex I; NADH dehydrogenase I<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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NADH:ubiquinone oxidoreductase, chain C,D<ref name='LIB:Riley_2006'/>, B2286<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NuoD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NuoCD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NuoC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
NADH:ubiquinone oxidoreductase, chain C,D<ref name='LIB:Riley_2006'/>, B2286<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NuoD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NuoCD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NuoC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Cellular Component'''
* GO:0005886 plasma membrane ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0030964 NADH dehydrogenase complex ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0045272 plasma membrane respiratory chain complex I ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0009061 anaerobic respiration ([http://www.geneontology.org/GO.evidence.shtml IMP])
'''Molecular Function'''
* GO:0015453 oxidoreduction-driven active transmembrane transporter activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0003954 NADH dehydrogenase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:nuoABCEFGHIJKLMN|nuoABCEFGHIJKLMN]]<ref name='LIB:EcoCyc10.6'/>, nuo1-14  
transcription unit(s): [[:Category:Txn_unit:nuoABCEFGHIJKLMN|nuoABCEFGHIJKLMN]]<ref name='LIB:EcoCyc10.6'/>, nuo1-14  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=nuoC&loc=MG1655:2401879..2400077,W3110:2408527..2406725,REL606:2347448..2345646,DH10B:2493644..2491842 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2493644&end=2491842&gene=nuoC&aa=mvnnmtdltaqepawqtrdhlddpvigelrnrfgpdaftvqatrtgvpvvwikreqllevgdflkklpkpyvmlfdlhgmderlrthreglpaadfsvfyhlisidrnrdimlkvalaendlhvptftklfpnanwyeretwdlfgitfdghpnlrrimmpqtwkghplrkdyparatefspfeltkakqdlemealtfkpeewgmkrgtenedfmflnlgpnhpsahgafrivlqldgeeivdcvpdigyhhrgaekmgerqswhsyipytdrieylggcvnempyvlaveklagitvpdrvnvirvmlselfrinshllyistfiqdvgamtpvffaftdrqkiydlveaitgfrmhpawfriggvahdlprgwdrllrefldwmpkrlasyekaalqntilkgrsqgvaaygakealewgttgaglratgidfdvrkarpysgyenfdfeipvgggvsdcytrvmlkveelrqslrileqclnnmpegpfkadhplttpppkertlqhietlithflqvswgpvmpanesfqmieatkginsyyltsdgstmsyrtrvrtpsfahlqqipaairgslvsdlivylgsidfvmsdvdr Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=nuoC+AND+escherichia+coli Pubmed(nuoC)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=nuoC Textpresso(nuoC)]


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Revision as of 23:38, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

nuoC

Gene Synonym(s)

ECK2280, b2286, JW5375, nuoCD, nuoD[1]

Product Desc.

NuoC[2][3];

Component of connecting fragment of NADH dehydrogenase I[3]; NADH dehydrogenase I[2][3]

NADH:ubiquinone oxidoreductase subunit C, complex I; NADH dehydrogenase I[4]

Product Synonyms(s)

NADH:ubiquinone oxidoreductase, chain C,D[1], B2286[2][1], NuoD[2][1], NuoCD[2][1], NuoC[2][1]

Function from GO

Cellular Component

Biological Process

Molecular Function

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): nuoABCEFGHIJKLMN[2], nuo1-14

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(nuoC)    Textpresso(nuoC)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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Leif (1995) find the starting amino acids at codon +4 (MVNN), in conflict with the more recent data of David (2002), which does not include these 4 amino acids and the initial Met. Alignment with Yersinia NuoC supports the second ATG annotated here. The reason for the discrepancy is not known as both used native protein preparations, although the protein band sequenced by Leif et al. was not the correct MW for the revised, fused NuoCD protein sequence. HT_Cmplx18_Mem: NuoB+NuoC.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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