rsgA:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''rsgA'' | ''rsgA'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK4157, b4161, JW4122, yjeQ''<ref name='LIB:Riley_2006'/> | ''ECK4157, b4161, JW4122, yjeQ''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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ribosome small subunit-dependent GTPase A<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ribosome small subunit-dependent GTPase A<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Ribosome-stimulated GTPase, function unknown; low adundance protein; putative RNA binding protein<ref name='LIB:EcoGene'/> | Ribosome-stimulated GTPase, function unknown; low adundance protein; putative RNA binding protein<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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ribosome small subunit-dependent GTPase A product<ref name='LIB:Riley_2006'/>, B4161 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjeQ product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RsgA product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ribosome small subunit-dependent GTPase A product<ref name='LIB:Riley_2006'/>, B4161 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjeQ product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RsgA product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
* GO:0019003 GDP binding ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Biological Process''' | |||
* GO:0042274 ribosomal small subunit biogenesis ([http://www.geneontology.org/GO.evidence.shtml IGI]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:rsgA|rsgA]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:rsgA|rsgA]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=rsgA&loc=MG1655:4389532..4388480,W3110:4396189..4395137,DH10B:4489894..4488842,REL606:4368612..4369664 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4368612&end=4369664&gene=rsgA&aa=mnanhqrrlktskekpdyddnlfgepdegivisrfgmhadvesadgdvhrcnirrtirslvtgdrvvwrpgkpaaegvnvkgiveavhertsvltrpdfydgvkpiaanidqivivsailpelslniidrylvacetlqiepiivlnkidllddegmafvneqmdiyrnigyrvlmvsshtqdglkpleealtgrisifagqsgvgkssllnallglqkeiltndisdnsglgqhtttaarlyhfphggdvidspgvrefglwhlepeqitqgfvefhdylglckyrdckhdtdpgcaireaveegkiaetrfenyhrilesmaqvktrknfsdtdd Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rsgA+AND+escherichia+coli Pubmed(rsgA)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rsgA Textpresso(rsgA)] | |||
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Revision as of 23:34, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
rsgA |
|---|---|
| Gene Synonym(s) |
ECK4157, b4161, JW4122, yjeQ[1] |
| Product Desc. |
ribosome small subunit-dependent GTPase A[2][3] Ribosome-stimulated GTPase, function unknown; low adundance protein; putative RNA binding protein[4] |
| Product Synonyms(s) |
ribosome small subunit-dependent GTPase A product[1], B4161 product[2][1], YjeQ product[2][1], RsgA product[2][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
rsgA(yjeQ) has been reported to be an essential gene, but deletion mutants have also been reported to grow slowly. RsgA:ribosomes is 1:200 in vivo. Guanine nucleotide-dependent 30S subunit binding greatly stimulates GTPase activity. OtherPDB (S.typhimurium):2RCN. RsgA may be involved in ribosome biogenesis.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.