secA:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''secA''  
''secA''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0099, b0098, JW0096, azi, pea, prlD''<ref name='LIB:Riley_2006'/>
''ECK0099, b0098, JW0096, azi, pea, prlD''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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SecA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
SecA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Translocon ATPase; targets protein precursors to the SecYE core translocon for secretion; autogenous translational repressor; ATP-dependent helicase activity on secMA mRNA; homodimeric/monomeric<ref name='LIB:EcoGene'/>
Translocon ATPase; targets protein precursors to the SecYE core translocon for secretion; autogenous translational repressor; ATP-dependent helicase activity on secMA mRNA; homodimeric/monomeric<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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preprotein translocase subunit, ATPase<ref name='LIB:Riley_2006'/>, B0098<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Pea<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Azi<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PrlD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SecA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
preprotein translocase subunit, ATPase<ref name='LIB:Riley_2006'/>, B0098<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Pea<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Azi<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PrlD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SecA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Cellular Component'''
* GO:0005737 cytoplasm ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0005886 plasma membrane ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Molecular Function'''
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
* GO:0000287 magnesium ion binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
'''Biological Process'''
* GO:0065002 intracellular protein transmembrane transport ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0015031 protein transport ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0006605 protein targeting ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0043952 protein transport by the Sec complex ([http://www.geneontology.org/GO.evidence.shtml IMP])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:secMA-mutT|secMA-mutT]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:secMA-mutT|secMA-mutT]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=secA&loc=MG1655:108279..110984,W3110:108279..110984,DH10B:82383..85088,REL606:111083..113788 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=111083&end=113788&gene=secA&aa=mliklltkvfgsrndrtlrrmrkvvniinamepemeklsdeelkgktaefrarlekgevlenlipeafavvreaskrvfgmrhfdvqllggmvlnerciaemrtgegktltatlpaylnaltgkgvhvvtvndylaqrdaennrplfeflgltvginlpgmpapakreayaaditygtnneygfdylrdnmafspeervqrklhyalvdevdsilideartpliisgpaedssemykrvnkiiphlirqekedsetfqgeghfsvdeksrqvnlterglvlieellvkegimdegeslyspanimlmhhvtaalrahalftrdvdyivkdgeviivdehtgrtmqgrrwsdglhqaveakegvqiqnenqtlasitfqnyfrlyeklagmtgtadteafefssiykldtvvvptnrpmirkdlpdlvymteaekiqaiiedikertakgqpvlvgtisiekselvsneltkagikhnvlnakfhaneaaivaqagypaavtiatnmagrgtdivlggswqaevaalenptaeqiekikadwqvrhdavleagglhiigterhesrridnqlrgrsgrqgdagssrfylsmedalmrifasdrvsgmmrklgmkpgeaiehpwvtkaianaqrkvesrnfdirkqlleyddvandqrraiysqrnelldvsdvsetinsiredvfkatidayippqsleemwdipglqerlkndfdldlpiaewldkepelheetlrerilaqsievyqrkeevvgaemmrhfekgvmlqtldslwkehlaamdylrqgihlrgyaqkdpkqeykresfsmfaamleslkyevistlskvqvrmpeeveeleqqrrmeaerlaqmqqlshqdddsaaaaalaaqtgerkvgrndpcpcgsgkkykqchgrlq Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=secA+AND+escherichia+coli Pubmed(secA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=secA Textpresso(secA)]


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Revision as of 23:32, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

secA

Gene Synonym(s)

ECK0099, b0098, JW0096, azi, pea, prlD[1]

Product Desc.

SecA[2][3];

Component of Sec Protein Secretion Complex[2][3]

Translocon ATPase; targets protein precursors to the SecYE core translocon for secretion; autogenous translational repressor; ATP-dependent helicase activity on secMA mRNA; homodimeric/monomeric[4]

Product Synonyms(s)

preprotein translocase subunit, ATPase[1], B0098[2][1], Pea[2][1], Azi[2][1], PrlD[2][1], SecA[2][1]

Function from GO

Cellular Component

Molecular Function

Biological Process

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): secMA-mutT[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(secA)    Textpresso(secA)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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Helicase activity is dispensable for both functions. Oligomerization induced by signal peptides. secA is regulated by the secretion competence of the SecM signal peptide. HT_Cmplx33_Cyt: AcpP+PurB+SecA. HT_Cmplx48_Mem: SecA+YdgA+YjiY.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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