suhB:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''suhB''  
''suhB''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2530, b2533, JW2517, ssyA, G478, sfiA''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''ECK2530, b2533, JW2517, ssyA, G478, sfiA''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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EG10983<ref name='LIB:EcoCyc10.6'/>; inositol monophosphatase, putative mRNA turnover protein<ref name='LIB:EcoCyc11.1'/>
EG10983<ref name='LIB:EcoCyc10.6'/>; inositol monophosphatase, putative mRNA turnover protein<ref name='LIB:EcoCyc11.1'/>
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Inositol-1-monophosphatase; mutation suppresses TS growth phenotype of rpoH15, dnaB121, and secY24; suhB mutations confers CS growth<ref name='LIB:EcoGene'/>
Inositol-1-monophosphatase; mutation suppresses TS growth phenotype of rpoH15, dnaB121, and secY24; suhB mutations confers CS growth<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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inositol monophosphatase<ref name='LIB:Riley_2006'/>, B2533<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SsyA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SfiA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SuhB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
inositol monophosphatase<ref name='LIB:Riley_2006'/>, B2533<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SsyA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SfiA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SuhB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0047954 glycerol-2-phosphatase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0046872 metal ion binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
* GO:0000287 magnesium ion binding ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0008934 inositol-1(or 4)-monophosphatase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0031403 lithium ion binding ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0046855 inositol phosphate dephosphorylation ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:suhB|suhB]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:suhB|suhB]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=suhB&loc=MG1655:2661464..2662267,W3110:2662098..2662901,REL606:2584141..2584944,DH10B:2753229..2754032 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2753229&end=2754032&gene=suhB&aa=mhpmlniavraarkagnliaknyetpdaveasqkgsndfvtnvdkaaeaviidtirksypqhtiiteesgelegtdqdvqwvidpldgttnfikrlphfavsiavrikgrtevavvydpmrnelftatrgqgaqlngyrlrgstardldgtilatgfpfkakqyattyinivgklfnecadfrrtgsaaldlayvaagrvdgffeiglrpwdfaagellvreaggivsdftgghnymltgnivagnprvvkamlanmrdelsdalkr Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=suhB+AND+escherichia+coli Pubmed(suhB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=suhB Textpresso(suhB)]


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Revision as of 23:29, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

suhB

Gene Synonym(s)

ECK2530, b2533, JW2517, ssyA, G478, sfiA[1][2]

Product Desc.

EG10983[2]; inositol monophosphatase, putative mRNA turnover protein[3]

Inositol-1-monophosphatase; mutation suppresses TS growth phenotype of rpoH15, dnaB121, and secY24; suhB mutations confers CS growth[4]

Product Synonyms(s)

inositol monophosphatase[1], B2533[2][1], SsyA[2][1], SfiA[2][1], SuhB[2][1]

Function from GO

Molecular Function

Biological Process

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): suhB[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(suhB)    Textpresso(suhB)

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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The N-terminal sequence was determined using protein made with a synthetic RBS, and thus is not a confirmation of the in vivo start site; the N-terminal Met was not clipped off the recombinant protein.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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