thiC:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''thiC'' | ''thiC'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3986, b3994, JW3958''<ref name='LIB:Riley_2006'/> | ''ECK3986, b3994, JW3958''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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thiamin biosynthesis protein ThiC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | thiamin biosynthesis protein ThiC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Hydroxymethylpyrimidine synthesis, for thiamine biosynthesis<ref name='LIB:EcoGene'/> | Hydroxymethylpyrimidine synthesis, for thiamine biosynthesis<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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thiamin (pyrimidine moiety) biosynthesis protein<ref name='LIB:Riley_2006'/>, B3994<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ThiC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | thiamin (pyrimidine moiety) biosynthesis protein<ref name='LIB:Riley_2006'/>, B3994<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ThiC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:thiCEFSGH|thiCEFSGH]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:thiCEFSGH|thiCEFSGH]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=thiC&loc=MG1655:4194122..4192227,W3110:3440582..3442477,REL606:4175710..4173815,DH10B:4293818..4291923 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4293818&end=4291923&gene=thiC&aa=msatkltrreqraraqhfidtlegtafpnskriyitgthpgvrvpmreiqlsptliggskeqpqyeeneaipvydtsgpygdpqiainvqqglaklrqpwidargdteeltvrssdytkarladdgldelrfsgvltpkrakagrrvtqlhyarqgiitpemefiairenmgrerirsevlrhqhpgmsfgahlpenitaefvrdevaagraiipaninhpesepmiigrnflvkvnanignsavtssieeeveklvwstrwgadtvmdlstgryihetrewilrnspvpigtvpiyqalekvngiaedltweafrdtlleqaeqgvdyftihagvllryvpmtakrltgivsrggsimakwclshhqenflyqhfreiceicaaydvslslgdglrpgsiqdandeaqfaelhtlgeltkiaweydvqvmiegpghvpmqmirrnmteelehcheapfytlgplttdiapgydhftsgigaamigwfgcamlcyvtpkehlglpnkedvkqglitykiaahaadlakghpgaqirdnamskarfefrwedqfnlaldpftarayhdetlpqesgkvahfcsmcgpkfcsmkisqevrdyaatqtiemgmadmsenfrarggeiylrkeea Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=thiC+AND+escherichia+coli Pubmed(thiC)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=thiC Textpresso(thiC)] | |||
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Revision as of 23:28, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
thiC |
|---|---|
| Gene Synonym(s) |
ECK3986, b3994, JW3958[1] |
| Product Desc. |
thiamin biosynthesis protein ThiC[2][3] Hydroxymethylpyrimidine synthesis, for thiamine biosynthesis[4] |
| Product Synonyms(s) |
thiamin (pyrimidine moiety) biosynthesis protein[1], B3994[2][1], ThiC[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
thiCEFSGH operon expression is controlled by a thiamine pyrophosphate (TPP) responsive riboswitch in the 5' UTR. The thiC riboswitch is the target for the antibiotic pyrithiamine.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.