tufB:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''tufB'' | ''tufB'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3971, b3980, JW3943, kirT, pulT''<ref name='LIB:Riley_2006'/> | ''ECK3971, b3980, JW3943, kirT, pulT''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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elongation factor Tu<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | elongation factor Tu<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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EF-Tu, Elongation Factor-Translation, unstable; GTP-dependent binding of aa-tRNA to the A-site of ribosomes; has intrinsic GTPase activity when bound to kirromycin<ref name='LIB:EcoGene'/> | EF-Tu, Elongation Factor-Translation, unstable; GTP-dependent binding of aa-tRNA to the A-site of ribosomes; has intrinsic GTPase activity when bound to kirromycin<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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B3980<ref name='LIB:EcoCyc10.6'/>, PulT<ref name='LIB:EcoCyc10.6'/>, KirT<ref name='LIB:EcoCyc10.6'/>, TufB<ref name='LIB:EcoCyc10.6'/>, EF-Tu<ref name='LIB:EcoCyc10.6'/> | B3980<ref name='LIB:EcoCyc10.6'/>, PulT<ref name='LIB:EcoCyc10.6'/>, KirT<ref name='LIB:EcoCyc10.6'/>, TufB<ref name='LIB:EcoCyc10.6'/>, EF-Tu<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:tufB|tufB]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:thrU-tyrU-glyT-thrT|thrU-tyrU-glyT-thrT]]<ref name='LIB:EcoCyc10.6'/>, thrU | transcription unit(s): [[:Category:Txn_unit:tufB|tufB]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:thrU-tyrU-glyT-thrT|thrU-tyrU-glyT-thrT]]<ref name='LIB:EcoCyc10.6'/>, thrU | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=tufB&loc=MG1655:4173967..4175151,W3110:3460737..3459553,REL606:4155555..4156739,DH10B:4273663..4274847 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4273663&end=4274847&gene=tufB&aa=mskekfertkphvnvgtighvdhgkttltaaittvlaktyggaarafdqidnapeekargitintshveydtptrhyahvdcpghadyvknmitgaaqmdgailvvaatdgpmpqtrehillgrqvgvpyiivflnkcdmvddeellelvemevrellsqydfpgddtpivrgsalkalegdaeweakilelagfldsyipeperaidkpfllpiedvfsisgrgtvvtgrvergiikvgeeveivgiketqkstctgvemfrklldegragenvgvllrgikreeiergqvlakpgtikphtkfesevyilskdeggrhtpffkgyrpqfyfrttdvtgtielpegvemvmpgdnikmvvtlihpiamddglrfaireggrtvgagvvakvls Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tufB+AND+escherichia+coli Pubmed(tufB)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=tufB Textpresso(tufB)] | |||
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Revision as of 23:26, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
tufB |
|---|---|
| Gene Synonym(s) |
ECK3971, b3980, JW3943, kirT, pulT[1] |
| Product Desc. |
EF-Tu, Elongation Factor-Translation, unstable; GTP-dependent binding of aa-tRNA to the A-site of ribosomes; has intrinsic GTPase activity when bound to kirromycin[4] |
| Product Synonyms(s) | |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): tufB[2], thrU-tyrU-glyT-thrT[2], thrU |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
mgiglio@SOM.UMARYLAND.EDU
tufB encodes an essential function, with duplicate gene tufA, such that tufA or tufB can be deleted, but the double mutant is inviable.[4]
References
- ↑ Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.