uvrA:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''uvrA''  
''uvrA''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK4050, b4058, JW4019, dar, dinE''<ref name='LIB:Riley_2006'/>
''ECK4050, b4058, JW4019, dar, dinE''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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excision nuclease subunit A<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
excision nuclease subunit A<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Excision nuclease subunit A; repair of UV damage to DNA; LexA regulon; binds Zn(II)<ref name='LIB:EcoGene'/>
Excision nuclease subunit A; repair of UV damage to DNA; LexA regulon; binds Zn(II)<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC<ref name='LIB:Riley_2006'/>, B4058<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Dar<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DinE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, UvrA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC<ref name='LIB:Riley_2006'/>, B4058<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Dar<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DinE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, UvrA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0005515 protein_binding ([http://www.geneontology.org/GO.evidence.shtml IPI])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:uvrA|uvrA]]<ref name='LIB:EcoCyc10.6'/>, OP00097  
transcription unit(s): [[:Category:Txn_unit:uvrA|uvrA]]<ref name='LIB:EcoCyc10.6'/>, OP00097  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=uvrA&loc=MG1655:4271894..4269072,W3110:4277461..4274639,REL606:4252803..4249981 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4252803&end=4249981&gene=uvrA&aa=mdkievrgarthnlkninlviprdklivvtglsgsgksslafdtlyaegqrryveslsayarqflslmekpdvdhieglspaisieqkstshnprstvgtiteihdylrllfarvgeprcpdhdvplaaqtvsqmvdnvlsqpegkrlmllapiikerkgehtktlenlasqgyiraridgevcdlsdppklelqkkhtievvvdrfkvrddltqrlaesfetalelsggtavvadmddpkaeellfsanfacpicgysmreleprlfsfnnpagacptcdglgvqqyfdpdrviqnpelslaggairgwdrrnfyyfqmlksladhykfdveapwgslsanvhkvvlygsgkeniefkymndrgdtsirrhpfegvlhnmerryketessavreelakfisnrpcascegtrlrrearhvyventplpaisdmsighameffnnlklagqrakiaekilkeigdrlkflvnvglnyltlsrsaetlsggeaqrirlasqigaglvgvmyvldepsiglhqrdnerllgtlihlrdlgntvivvehdedairaadhvidigpgagvhggevvaegpleaimavpesltgqymsgkrkievpkkrvpanpekvlkltgargnnlkdvtltlpvglftcitgvsgsgkstlindtlfpiaqrqlngatiaepapyrdiqglehfdkvididqspigrtprsnpatytgvftpvrelfagvpesrargytpgrfsfnvrggrceacqgdgvikvemhflpdiyvpcdqckgkrynretleikykgktihevldmtieeareffdavpalarklqtlmdvgltyirlgqsattlsggeaqrvklarelskrgtgqtlyildepttglhfadiqqlldvlhklrdqgntivviehnldviktadwivdlgpeggsgggeilvsgtpetvaeceashtarflkpml Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=uvrA+AND+escherichia+coli Pubmed(uvrA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=uvrA Textpresso(uvrA)]


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Revision as of 23:25, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

uvrA

Gene Synonym(s)

ECK4050, b4058, JW4019, dar, dinE[1]

Product Desc.

excision nuclease subunit A[2][3];

Component of UvrABC Nucleotide Excision Repair Complex[2][3]

Excision nuclease subunit A; repair of UV damage to DNA; LexA regulon; binds Zn(II)[4]

Product Synonyms(s)

ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC[1], B4058[2][1], Dar[2][1], DinE[2][1], UvrA[2][1]

Function from GO

Molecular Function

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): uvrA[2], OP00097

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(uvrA)    Textpresso(uvrA)

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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