waaA:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left |Standard Name
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''waaA''  
''waaA''  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left |Gene Synonym(s)
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''kdtA, ECK3623, b3633, JW3608''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/>
''kdtA, ECK3623, b3633, JW3608''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/>
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!align=left {{table_heading_style}} |Product Desc.
!align=left |Product Desc.
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3-deoxy-D-manno-octulosonate(Kdo)-lipid A transferase<ref name='LIB:EcoGene'/>
3-deoxy-D-manno-octulosonate(Kdo)-lipid A transferase<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left |Product Synonyms(s)
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3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase)<ref name='LIB:Riley_2006'/>, B3633<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, WaaA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, KdtA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase)<ref name='LIB:Riley_2006'/>, B3633<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, WaaA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, KdtA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left |Knock-Out Phenotype
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lethal (see PMID:7499229)
lethal (see PMID:7499229)
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:kdtA|kdtA]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:kdtA-coaD|kdtA-coaD]]<ref name='LIB:EcoCyc10.6'/>, kdtAB, waaA-coaD  
transcription unit(s): [[:Category:Txn_unit:kdtA|kdtA]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:kdtA-coaD|kdtA-coaD]]<ref name='LIB:EcoCyc10.6'/>, kdtAB, waaA-coaD  
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left |Regulation/Activity
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Revision as of 01:11, 10 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

waaA

Gene Synonym(s)

kdtA, ECK3623, b3633, JW3608[1][2]

Product Desc.

3-deoxy-D-manno-octulosonate(Kdo)-lipid A transferase[3]

Product Synonyms(s)

3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase)[1], B3633[4][1], WaaA[4][1], KdtA[4][1]

Knock-Out Phenotype

lethal (see PMID:7499229[5])

Regulation/Expression

transcription unit(s): kdtA[4], kdtA-coaD[4], kdtAB, waaA-coaD

Regulation/Activity


edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


WaaA adds 2 Kdo residues to lipid IVA. waaA is an essential gene. Mutagenesis eliminated ATG a codon 52 as a start codon (Belunis and Raetz, 1992).[3]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  4. ↑ 4.0 4.1 4.2 4.3 4.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  5. ↑ Belunis, CJ et al. (1995) Inhibition of lipopolysaccharide biosynthesis and cell growth following inactivation of the kdtA gene in Escherichia coli. J. Biol. Chem. 270 27646-52 PubMed
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