trmI:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left |Standard Name
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''trmI''  
''trmI''  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left |Gene Synonym(s)
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''yggH, ECK2955, b2960, JW2927, trmB''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/><ref name='LIB:EcoCyc10.6'/>
''yggH, ECK2955, b2960, JW2927, trmB''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/><ref name='LIB:EcoCyc10.6'/>
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!align=left {{table_heading_style}} |Product Desc.
!align=left |Product Desc.
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tRNA (m7G46) methyltransferase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
tRNA (m7G46) methyltransferase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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tRNA (m7G46) methyltransferase, SAM-dependent; monomeric<ref name='LIB:EcoGene'/>
tRNA (m7G46) methyltransferase, SAM-dependent; monomeric<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left |Product Synonyms(s)
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tRNA (m7G46) methyltransferase, SAM-dependent<ref name='LIB:Riley_2006'/>, B2960<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YggH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TrmB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TrmI<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/>  
tRNA (m7G46) methyltransferase, SAM-dependent<ref name='LIB:Riley_2006'/>, B2960<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YggH<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TrmB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TrmI<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/>  
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:yggL|yggL]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yggL|yggL]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left |Regulation/Activity
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Revision as of 01:01, 10 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

trmI

Gene Synonym(s)

yggH, ECK2955, b2960, JW2927, trmB[1][2][3]

Product Desc.

tRNA (m7G46) methyltransferase[3][2]

tRNA (m7G46) methyltransferase, SAM-dependent; monomeric[4]

Product Synonyms(s)

tRNA (m7G46) methyltransferase, SAM-dependent[1], B2960[3][1], YggH[3][1], TrmB[3][1], TrmI[2][1]

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yggL[3]

Regulation/Activity


edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


yggH is renamed trmI in Bjork and Hagervall's EcoSal Module 4.6.2. trmI is a non-essential gene. Although trmB was mapped to 6', trmI is at 66'; trmB may be regulator of the structural gene trmI, although it is also being used as a synonym of trmI(yggH). AFMB Structural Genomics target No. 128 (http://afmb.cnrs-mrs.fr/article171.html).[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 3.3 3.4 3.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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