thrL:Gene Product(s): Difference between revisions

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|-
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!align=left {{table heading style}} |Standard name
!align=left |Standard name
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ThrL  
ThrL  
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!align=left {{table heading style}} |Synonyms
!align=left |Synonyms
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thr operon leader peptide<ref name='LIB:Riley_2006'/>, B0001<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ThrL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
thr operon leader peptide<ref name='LIB:Riley_2006'/>, B0001<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ThrL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left {{table heading style}} |Product description
!align=left |Product description
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thr operon leader peptide<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
thr operon leader peptide<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Regulatory leader peptide for thrABC operon<ref name='LIB:EcoGene'/>
Regulatory leader peptide for thrABC operon<ref name='LIB:EcoGene'/>
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!align=left {{table heading style}} |EC number (for enzymes)
!align=left |EC number (for enzymes)
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!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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complete  
complete  


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!|Partner Type!!Partner!!Notes!!References!!Evidence
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!|Compartment!!Description!!Evidence!!Source!!Notes
!|Compartment!!Description!!Evidence!!Source!!Notes


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|-
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!align=left {{table heading style}} |Sequence
!align=left |Sequence
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[http://biocyc.org/ECOLI/sequence-aa?object=EG11277-MONOMER at EcoCyc]  
[http://biocyc.org/ECOLI/sequence-aa?object=EG11277-MONOMER at EcoCyc]  
<pre>MKRISTTITT TITITTGNGA G</pre>  
<pre>MKRISTTITT TITITTGNGA G</pre>  
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!align=left {{table heading style}} |Length
!align=left |Length
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21
21
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!align=left {{table heading style}} |Mol. Wt
!align=left |Mol. Wt
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2.138 kDa
2.138 kDa
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!align=left {{table heading style}} |pI
!align=left |pI
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11.8 (calculated)
11.8 (calculated)
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!align=left {{table heading style}} |Extinction coefficient
!align=left |Extinction coefficient
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0 (calc based on  Y,  W, and  C residues)
0 (calc based on  Y,  W, and  C residues)


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<beststructure>
<beststructure>
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</beststructure>
</beststructure>
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!align=left {{table heading style}} |Models
!align=left |Models
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View models at:
View models at:
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* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP)
* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP)


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Revision as of 00:56, 10 January 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

ThrL

Synonyms

thr operon leader peptide[1], B0001[2][1], ThrL[2][1]

Product description

thr operon leader peptide[2][3]

Regulatory leader peptide for thrABC operon[4]

EC number (for enzymes)


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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0009088

threonine biosynthetic process

GO_REF:0000002
GO_REF:0000004

IEA: Inferred from Electronic Annotation

InterPro:IPR011720
SP_KW:KW-0791

P

Seeded from EcoCyc 12.5 [5]

complete

GO:0008652

amino acid biosynthetic process

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0028

P

Seeded from EcoCyc [6]

complete

GO:0031556

transcriptional attenuation by ribosome

GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_01907

P

Seeded from EcoCyc [6]

complete

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Source Notes
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Notes

Structure and Physical Properties

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Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Sequence

at EcoCyc 

MKRISTTITT TITITTGNGA G
Length

21

Mol. Wt

2.138 kDa

pI

11.8 (calculated)

Extinction coefficient

0 (calc based on Y, W, and C residues)

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Domains/Motifs/Modification Sites See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes
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Structure
See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure> gene=thrL taxon=562,83333 </beststructure>

Models

View models at:

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Structure figures

Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:EG11277-MONOMER

UniProt (EcoliWiki Page)

UniProt:P0AD86

RefSeq (EcoliWiki Page)

RefSeq:NP_414542


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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  6. ↑ 6.0 6.1 EcoCyc (release 13.0; 2009) Keseler, IM et al. (2009) Nucleic Acids Res. 37(Database issue):D464-70

Categories

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