mukB:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''mukB''  
''mukB''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0915, b0924, JW0907''<ref name='LIB:Riley_2006'/>
''ECK0915, b0924, JW0907''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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cell division protein involved in chromosome partitioning<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
cell division protein involved in chromosome partitioning<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Chromosome condensin MukBEF, ATPase and DNA-binding subunit<ref name='LIB:EcoGene'/>
Chromosome condensin MukBEF, ATPase and DNA-binding subunit<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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fused chromosome partitioning protein: predicted nucleotide hydrolase<ref name='LIB:Riley_2006'/>, conserved protein<ref name='LIB:Riley_2006'/>, B0924<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MukB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
fused chromosome partitioning protein: predicted nucleotide hydrolase<ref name='LIB:Riley_2006'/>, conserved protein<ref name='LIB:Riley_2006'/>, B0924<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MukB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Cellular Component'''
* GO:0000796 condensin complex ([http://www.geneontology.org/GO.evidence.shtml IMP])
'''Molecular Function'''
* GO:0003677 DNA binding ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
* GO:0005524 ATP binding ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0005525 GTP binding ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0030261 chromosome condensation ([http://www.geneontology.org/GO.evidence.shtml IMP,IDA])
* GO:0007059 chromosome segregation ([http://www.geneontology.org/GO.evidence.shtml IMP])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:smtA-mukFEB|smtA-mukFEB]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:smtA-mukFEB|smtA-mukFEB]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=mukB&loc=MG1655:975549..980009,W3110:976748..981208,DH10B:1029477..1033937,REL606:993418..997878 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=993418&end=997878&gene=mukB&aa=miergkfrsltlinwngffartfdldelvttlsggngagksttmaafvtalipdltllhfrntteagatsgsrdkglhgklkagvcysmldtinsrhqrvvvgvrlqqvagrdrkvdikpfaiqglpmsvqptqlvtetlnerqarvlplnelkdkleamegvqfkqfnsitdyhslmfdlgiiarrlrsasdrskfyrlieaslyggissaitrslrdyllpensgvrkafqdmeaalrenrmtleairvtqsdrdlfkhliseatnyvaadymrhanerrvhldkalefrrelhtsrqqlaaeqykhvdmarelaehngaegdleadyqaasdhlnlvqtalrqqekieryeadldelqirleeqnevvaeaierqqenearaeaaelevdelksqladyqqaldvqqtraiqynqaiaalnrakelchlpdltadcaaewletfqakeleatekmlsleqkmsmaqtahsqfeqayqlvvaingplarneawdvarellregvdqrhlaeqvqplrmrlseleqrlreqqeaerlladfckrqgknfdidelealhqeleariaslsdsvsnareermalrqeqeqlqsriqslmqrapvwlaaqnslnqlseqcgeeftssqdvteylqqllerereaiverdevgarknavdeeierlsqpggsedqrlnalaerfggvllseiyddvsledapyfsalygpsrhaivvpdlsqvtehlegltdcpedlyliegdpqsfddsvfsvdelekavvvkiadrqwrysrfpevplfgraaresrieslhaerevlserfatlsfdvqktqrlhqafsrfigshlavafesdpeaeirqlnsrrveleralsnhendnqqqriqfeqakegvtalnrilprlnlladdsladrvdeirerldeaqeaarfvqqfgnqlaklepivsvlqsdpeqfeqlkedyaysqqmqrdarqqafaltevvqrrahfsysdsaemlsgnsdlneklrerleqaeaertrarealrghaaqlsqynqvlaslkssydtkkellndlqrelqdigvradsgaeerarirrdelhaqlsnnrsrrnqlekaltfceaemdnltrklrklerdyfemreqvvtakagwcavmrmvkdngverrlhrrelaylsaddlrsmsdkalgalrlavadnehlrdvlrmsedpkrperkiqffvavyqhlrerirqdiirtddpveaieqmeielsrlteeltsreqklaissrsvaniirktiqreqnrirmlnqglqnvsfgqvnsvrlnvnvrethamlldvlseqheqhqdlfnsnrltfsealaklyqrlnpqidmgqrtpqtigeelldyrnylemevevnrgsdgwlraesgalstgeaigtgmsilvmvvqswedesrrlrgkdispcrllfldeaarldarsiatlfelcerlqmqliiaapenispekgttyklvrkvfqntehvhvvglrgfapqlpetlpgtdeapsqas Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=mukB+AND+escherichia+coli Pubmed(mukB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=mukB Textpresso(mukB)]


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Revision as of 23:41, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

mukB

Gene Synonym(s)

ECK0915, b0924, JW0907[1]

Product Desc.

cell division protein involved in chromosome partitioning[2][3];

Component of MukB-MukE-MukF complex[3]

Chromosome condensin MukBEF, ATPase and DNA-binding subunit[4]

Product Synonyms(s)

fused chromosome partitioning protein: predicted nucleotide hydrolase[1], conserved protein[1], B0924[2][1], MukB[2][1]

Function from GO

Cellular Component

Molecular Function

Biological Process

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): smtA-mukFEB[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(mukB)    Textpresso(mukB)

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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Condensin is required for chromosome partitioning and compaction. Purified MukB and Topo II introduces right-handed knots into DNA. Coiled coil protein.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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