menB:Quickview: Difference between revisions
Jump to navigation
Jump to search
Update TableEdit tables. |
update QV table |
||
| Line 27: | Line 27: | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Standard Name | ||
|| | || | ||
''menB'' | ''menB'' | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
|| | || | ||
''ECK2256, b2262, JW2257''<ref name='LIB:Riley_2006'/> | ''ECK2256, b2262, JW2257''<ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
|| | || | ||
NAPHTHOATE-SYN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | NAPHTHOATE-SYN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
| Line 41: | Line 41: | ||
1,4-Dihydroxy-2-naphthoate synthase; menaquinone biosynthesis<ref name='LIB:EcoGene'/> | 1,4-Dihydroxy-2-naphthoate synthase; menaquinone biosynthesis<ref name='LIB:EcoGene'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
|| | || | ||
dihydroxynaphthoic acid synthetase<ref name='LIB:Riley_2006'/>, B2262<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MenB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DHNA synthetase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, O-succinylbenzoyl-CoA 1,4-dihydroxy-2-naphthoate-lyase (cyclizing)<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | dihydroxynaphthoic acid synthetase<ref name='LIB:Riley_2006'/>, B2262<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MenB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DHNA synthetase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, O-succinylbenzoyl-CoA 1,4-dihydroxy-2-naphthoate-lyase (cyclizing)<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Function from GO | ||
|| | || | ||
'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
* GO:0008935 naphthoate synthase activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Biological Process''' | |||
* GO:0009234 menaquinone biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
|| | |||
|- | |||
!align=left {{table_heading_style}} |Regulation/Expression | |||
|| | || | ||
transcription unit(s): [[:Category:Txn_unit:menBCE|menBCE]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:menFD-yfbB-menBCE|menFD-yfbB-menBCE]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:menBCE|menBCE]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:menFD-yfbB-menBCE|menFD-yfbB-menBCE]]<ref name='LIB:EcoCyc10.6'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
|| | || | ||
|- | |||
!align=left {{table_heading_style}} |Quick Links | |||
|| | |||
[http://ecoliwiki.net/tools/display_dna.php?gene=menB&loc=MG1655:2374841..2373984,W3110:2381489..2380632,REL606:2323332..2322475,DH10B:2465829..2464972 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2465829&end=2464972&gene=menB&aa=miypdeamlyapvewhdcsegfediryekstdgiakitinrpqvrnafrpltvkemiqaladaryddnigviiltgagdkafcsggdqkvrgdyggykddsgvhhlnvldfqrqirtcpkpvvamvagysiggghvlhmmcdltiaadnaifgqtgpkvgsfdggwgasymarivgqkkareiwflcrqydakqaldmglvntvvpladleketvrwcremlqnspmalrclkaalnadcdgqaglqelagnatmlfymteegqegrnafnqkrqpdfskfkrnp Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=menB+AND+escherichia+coli Pubmed(menB)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=menB Textpresso(menB)] | |||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Revision as of 23:44, 21 January 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
menB |
|---|---|
| Gene Synonym(s) |
ECK2256, b2262, JW2257[1] |
| Product Desc. |
1,4-Dihydroxy-2-naphthoate synthase; menaquinone biosynthesis[4] |
| Product Synonyms(s) |
dihydroxynaphthoic acid synthetase[1], B2262[2][1], MenB[2][1], DHNA synthetase[2][1], O-succinylbenzoyl-CoA 1,4-dihydroxy-2-naphthoate-lyase (cyclizing)[2][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): menBCE[2], menFD-yfbB-menBCE[2] |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.