lysU:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''lysU''  
''lysU''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK4123, b4129, JW4090, supN''<ref name='LIB:Riley_2006'/>
''ECK4123, b4129, JW4090, supN''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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lysyl-tRNA synthetase (LysRSu), inducible<ref name='LIB:EcoCyc10.6'/>; lysyl-tRNA synthetase<ref name='LIB:EcoCyc11.1'/>;  
lysyl-tRNA synthetase (LysRSu), inducible<ref name='LIB:EcoCyc10.6'/>; lysyl-tRNA synthetase<ref name='LIB:EcoCyc11.1'/>;  
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Lysine--tRNA ligase, heat inducible; Ap4A and Ap3A synthase<ref name='LIB:EcoGene'/>
Lysine--tRNA ligase, heat inducible; Ap4A and Ap3A synthase<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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lysine tRNA synthetase, inducible<ref name='LIB:Riley_2006'/>, B4129<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LysU<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
lysine tRNA synthetase, inducible<ref name='LIB:Riley_2006'/>, B4129<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LysU<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0004824 lysine-tRNA ligase activity ([http://www.geneontology.org/GO.evidence.shtml IDA,IGI])
* GO:0016874 ligase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0000287 magnesium ion binding ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0005524 ATP binding ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Cellular Component'''
* GO:0005624 membrane fraction ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0005829 cytosol ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0005737 cytoplasm ([http://www.geneontology.org/GO.evidence.shtml IC])
'''Biological Process'''
* GO:0006430 lysyl-tRNA aminoacylation ([http://www.geneontology.org/GO.evidence.shtml IDA,IGI])
* GO:0006418 tRNA aminoacylation for protein translation ([http://www.geneontology.org/GO.evidence.shtml IGI])
* GO:0006412 translation ([http://www.geneontology.org/GO.evidence.shtml IGI])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:lysU|lysU]]<ref name='LIB:EcoCyc10.6'/>, OP00312  
transcription unit(s): [[:Category:Txn_unit:lysU|lysU]]<ref name='LIB:EcoCyc10.6'/>, OP00312  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=lysU&loc=MG1655:4352740..4351223,W3110:4359395..4357878,REL606:4333437..4331920,DH10B:4453102..4451585 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4453102&end=4451585&gene=lysU&aa=mseqetrganeaidfndelrnrreklaalrqqgvafpndfrrdhtsdqlheefdakdnqeleslnievsvagrmmtrrimgkasfvtlqdvggriqlyvardslpegvyndqfkkwdlgdiigargtlfktqtgelsihctelrlltkalrplpdkfhglqdqevryrqryldliandksrqtfvvrskilaairqfmvargfmevetpmmqvipggasarpfithhnaldldmylriapelylkrlvvggfervfeinrnfrnegisvrhnpeftmmelymayadyhdlielteslfrtlaqevlgttkvtygehvfdfgkpfekltmreaikkyrpetdmadldnfdaakalaesigitvekswglgrivteifdevaeahliqptfiteypaevsplarrndvnpeitdrfeffiggreigngfselndaedqaerfqeqvnakaagddeamfydedyvtaleyglpptaglgigidrmimlftnshtirdvilfpamrpqk Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=lysU+AND+escherichia+coli Pubmed(lysU)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=lysU Textpresso(lysU)]


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Revision as of 23:45, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

lysU

Gene Synonym(s)

ECK4123, b4129, JW4090, supN[1]

Product Desc.

lysyl-tRNA synthetase (LysRSu), inducible[2]; lysyl-tRNA synthetase[3];

Component of lysyl-tRNA synthetase (LysRSu), inducible[2]

Lysine--tRNA ligase, heat inducible; Ap4A and Ap3A synthase[4]

Product Synonyms(s)

lysine tRNA synthetase, inducible[1], B4129[2][1], LysU[2][1]

Function from GO

Molecular Function

Cellular Component

Biological Process

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): lysU[2], OP00312

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(lysU)    Textpresso(lysU)

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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