lpxC:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''lpxC'' | ''lpxC'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0097, b0096, JW0094, asmB, envA''<ref name='LIB:Riley_2006'/> | ''ECK0097, b0096, JW0094, asmB, envA''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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UDP-3-O-acyl N-acetylglucosamine deacetylase | UDP-3-O-acyl N-acetylglucosamine deacetylase | ||
Lipid A biosynthesis, UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine deacetylase; zinc metalloamidase; cell envelope and cell separation<ref name='LIB:EcoGene'/> | Lipid A biosynthesis, UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine deacetylase; zinc metalloamidase; cell envelope and cell separation<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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UDP-3-O-acyl N-acetylglucosamine deacetylase<ref name='LIB:Riley_2006'/>, B0096<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, EnvA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AsmB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LpxC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | UDP-3-O-acyl N-acetylglucosamine deacetylase<ref name='LIB:Riley_2006'/>, B0096<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, EnvA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AsmB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LpxC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0019213 deacetylase activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Biological Process''' | |||
* GO:0009245 lipid A biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
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!align=left {{table_heading_style}} |Knock-Out Phenotype | |||
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lethal (see PMID:2824434) | lethal (see PMID:2824434) | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Expression | ||
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transcription unit(s): [[:Category:Txn_unit:lpxC|lpxC]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:lpxC|lpxC]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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[[kegg:ko00540.html|LPS biosynthesis]] | [[kegg:ko00540.html|LPS biosynthesis]] | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=lpxC&loc=MG1655:106557..107474,W3110:106557..107474,DH10B:80661..81578,REL606:109361..110278 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=109361&end=110278&gene=lpxC&aa=mikqrtlkrivqatgvglhtgkkvtltlrpapantgviyrrtdlnppvdfpadaksvrdtmlctclvnehdvristvehlnaalaglgidnivievnapeipimdgsaapfvyllldagidelncakkfvriketvrvedgdkwaefkpyngfsldftidfnhpaidssnqryamnfsadafmrqisrartfgfmrdieylqsrglclggsfdcaivvddyrvlnedglrfedefvrhkmldaigdlfmcghniigaftayksghalnnkllqavlakqeaweyvtfqddaelplafkapsavla Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=lpxC+AND+escherichia+coli Pubmed(lpxC)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=lpxC Textpresso(lpxC)] | |||
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Revision as of 23:46, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
lpxC |
|---|---|
| Gene Synonym(s) |
ECK0097, b0096, JW0094, asmB, envA[1] |
| Product Desc. |
UDP-3-O-acyl N-acetylglucosamine deacetylase Lipid A biosynthesis, UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine deacetylase; zinc metalloamidase; cell envelope and cell separation[2] |
| Product Synonyms(s) |
UDP-3-O-acyl N-acetylglucosamine deacetylase[1], B0096[3][1], EnvA[3][1], AsmB[3][1], LpxC[3][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype |
lethal (see PMID:2824434[4]) |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
LpxC regulated degradation is facilitated by FtsH.[2]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 3.0 3.1 3.2 3.3 3.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ Beall, B & Lutkenhaus, J (1987) Sequence analysis, transcriptional organization, and insertional mutagenesis of the envA gene of Escherichia coli. J. Bacteriol. 169 5408-15 PubMed