lpxC:Evolution

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Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT1G25210 (score: 1.000; bootstrap: 100%)
  • AT1G25054 (score: 0.989)
  • AT1G24793 (score: 0.877)
  • AT1G25141 (score: 0.877)
  • AT1G24880 (score: 0.834)
  • AT3G13680 (score: 0.115)
  • AT4G17200 (score: 0.108)
  • AT3G20030 (score: 0.085)
  • AT3G49520 (score: 0.084)
  • AT3G16740 (score: 0.077)
  • AT3G19890 (score: 0.076)
  • AT1G32140 (score: 0.076)
  • AT3G13820 (score: 0.072)
  • AT5G60560 (score: 0.071)
  • AT3G17620 (score: 0.070)
  • AT3G19880 (score: 0.069)
  • AT3G17320 (score: 0.066)
  • AT2G18780 (score: 0.065)
  • AT1G66490 (score: 0.065)
  • AT2G17830 (score: 0.063)
  • AT1G54550 (score: 0.061)
  • AT5G51000 (score: 0.060)
  • AT5G42460 (score: 0.058)
  • AT4G05080 (score: 0.058)
  • AT5G36730 (score: 0.058)
  • AT5G36820 (score: 0.058)
  • AT5G36200 (score: 0.058)
  • AT3G19560 (score: 0.057)
  • AT3G22421 (score: 0.056)
  • AT3G16880 (score: 0.054)
  • AT3G19470 (score: 0.053)
  • AT3G22940 (score: 0.053)
  • AT3G24580 (score: 0.051)
  • AT5G47300 (score: 0.050)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000016283 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

LPXC

From SHIGELLACYC

E. coli O157

LPXC

From ECOO157CYC


Do-It-Yourself Web Tools

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase

Superfamily (EcoliWiki Page)

SUPERFAMILY:54211

Superfamily (EcoliWiki Page)

SUPERFAMILY:54211

EcoCyc

EcoCyc:EG10265

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10265

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000259

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0261

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0000336

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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