ihfB:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''ihfB'' | ''ihfB'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0903, b0912, JW0895, himD, hip, himA, hid''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''ECK0903, b0912, JW0895, himD, hip, himA, hid''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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IhfB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | IhfB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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Integration Host Factor (IHF), beta subunit; host infection, mutant phage lambda; site-specific recombination; sequence-specific DNA-binding transcriptional activator<ref name='LIB:EcoGene'/> | Integration Host Factor (IHF), beta subunit; host infection, mutant phage lambda; site-specific recombination; sequence-specific DNA-binding transcriptional activator<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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integration host factor (IHF), DNA-binding protein, beta subunit<ref name='LIB:Riley_2006'/>, B0912<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IhfB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Hip<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HimD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, integration host factor (IHF), β subunit; site-specific recombination<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Hid<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HimA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | integration host factor (IHF), DNA-binding protein, beta subunit<ref name='LIB:Riley_2006'/>, B0912<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IhfB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Hip<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HimD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, integration host factor (IHF), β subunit; site-specific recombination<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Hid<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HimA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Biological Process''' | |||
* GO:0006350 transcription ([http://www.geneontology.org/GO.evidence.shtml IDA,IMP,IEP]) | |||
'''Molecular Function''' | |||
* GO:0016563 transcription activator activity ([http://www.geneontology.org/GO.evidence.shtml IDA,IMP,IEP]) | |||
* GO:0016564 transcription repressor activity ([http://www.geneontology.org/GO.evidence.shtml IDA,IMP,IEP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:rpsA-ihfB|rpsA-ihfB]]<ref name='LIB:EcoCyc10.6'/>, rpsA-himD, [[:Category:Txn_unit:ihfB|ihfB]]<ref name='LIB:EcoCyc10.6'/>, OP00241, himD | transcription unit(s): [[:Category:Txn_unit:rpsA-ihfB|rpsA-ihfB]]<ref name='LIB:EcoCyc10.6'/>, rpsA-himD, [[:Category:Txn_unit:ihfB|ihfB]]<ref name='LIB:EcoCyc10.6'/>, OP00241, himD | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=ihfB&loc=MG1655:963051..963335,W3110:964250..964534,DH10B:1016979..1017263 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1016979&end=1017263&gene=ihfB&aa=mtkselierlatqqshipaktvedavkemlehmastlaqgerieirgfgsfslhyraprtgrnpktgdkvelegkyvphfkpgkelrdraniyg Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ihfB+AND+escherichia+coli Pubmed(ihfB)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ihfB Textpresso(ihfB)] | |||
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Revision as of 23:50, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
ihfB |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
Component of IHF transcriptional dual regulator[2][3] Integration Host Factor (IHF), beta subunit; host infection, mutant phage lambda; site-specific recombination; sequence-specific DNA-binding transcriptional activator[4] |
| Product Synonyms(s) |
integration host factor (IHF), DNA-binding protein, beta subunit[1], B0912[2][1], IhfB[2][1], Hip[2][1], HimD[2][1], integration host factor (IHF), β subunit; site-specific recombination[2][1], Hid[2][1], HimA[2][1] |
| Function from GO |
Biological Process
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): rpsA-ihfB[2], rpsA-himD, ihfB[2], OP00241, himD |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.