glmM:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
Update TableEdit tables.
update QV table
Line 27: Line 27:


|-
|-
!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
||
||
''glmM''  
''glmM''  
|-
|-
!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
||
||
''ECK3165, b3176, JW3143, mrsA, yhbF''<ref name='LIB:Riley_2006'/>
''ECK3165, b3176, JW3143, mrsA, yhbF''<ref name='LIB:Riley_2006'/>
|-
|-
!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
||
||


Phosphoglucosamine mutase; UDP-GlcNAc pathway, peptidoglycan, lipopolysaccharide synthesis; mRNA stability effects<ref name='LIB:EcoGene'/>
Phosphoglucosamine mutase; UDP-GlcNAc pathway, peptidoglycan, lipopolysaccharide synthesis; mRNA stability effects<ref name='LIB:EcoGene'/>
|-
|-
!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
||
||
phosphoglucosamine mutase<ref name='LIB:Riley_2006'/>, B3176<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhbF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GlmM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MrsA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
phosphoglucosamine mutase<ref name='LIB:Riley_2006'/>, B3176<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhbF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GlmM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MrsA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
|-
|-
!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
||
||
'''Molecular Function'''
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
* GO:0008966 phosphoglucosamine mutase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0006048 UDP-N-acetylglucosamine biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0046777 protein amino acid autophosphorylation ([http://www.geneontology.org/GO.evidence.shtml IDA])


|-
|-
!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
||
 
|-
!align=left {{table_heading_style}} |Regulation/Expression
||
||
transcription unit(s): [[:Category:Txn_unit:glmM|glmM]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:glmM|glmM]]<ref name='LIB:EcoCyc10.6'/>  
|-
|-
!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
||


|-
!align=left {{table_heading_style}} |Quick Links
||
[http://ecoliwiki.net/tools/display_dna.php?gene=glmM&loc=MG1655:3322092..3320755,W3110:3323925..3322588,REL606:3259304..3257967,DH10B:3419837..3418500 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3419837&end=3418500&gene=glmM&aa=msnrkyfgtdgirgrvgdapitpdfvlklgwaagkvlarhgsrkiiigkdtrisgymlesaleaglaaaglsalftgpmptpavayltrtfraeagivisashnpfydngikffsidgtklpdaveeaieaemekeiscvdsaelgkasrivdaagryiefckatfpnelslselkivvdcangatyhiapnvlrelganviaigcepngvninaevgatdvralqarvlaekadlgiafdgdgdrvimvdhegnkvdgdqimyiiareglrqgqlrggavgtlmsnmglelalkqlgipfarakvgdryvlekmqekgwrigaensghvilldktttgdgivaglqvlaamarnhmslhdlcsgmkmfpqilvnvrytagsgdplehesvkavtaeveaalgnrgrvllrksgteplirvmvegedeaqvtefahriadavkav Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=glmM+AND+escherichia+coli Pubmed(glmM)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=glmM Textpresso(glmM)]


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  

Revision as of 23:56, 21 January 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

glmM

Gene Synonym(s)

ECK3165, b3176, JW3143, mrsA, yhbF[1]

Product Desc.

Phosphoglucosamine mutase; UDP-GlcNAc pathway, peptidoglycan, lipopolysaccharide synthesis; mRNA stability effects[2]

Product Synonyms(s)

phosphoglucosamine mutase[1], B3176[3][1], YhbF[3][1], GlmM[3][1], MrsA[3][1]

Function from GO

Molecular Function

Biological Process

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): glmM[3]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(glmM)    Textpresso(glmM)

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


Autophosphorylated enzyme (at Ser-102) is active form. glmM is an essential gene. Binds TrxA (Kumar, 2004).[2]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  3. ↑ 3.0 3.1 3.2 3.3 3.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7