dnaB:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
Update TableEdit tables.
update QV table
Line 27: Line 27:


|-
|-
!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
||
||
''dnaB''  
''dnaB''  
|-
|-
!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
||
||
''ECK4044, b4052, JW4012, groP, grpA, grpD''<ref name='LIB:Riley_2006'/>
''ECK4044, b4052, JW4012, groP, grpA, grpD''<ref name='LIB:Riley_2006'/>
|-
|-
!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
||
||
DnaB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
DnaB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
Line 43: Line 43:
Replicative DNA helicase; DNA-dependent ATPase involved in DNA synthesis; binds DNA contrahelicase termination protein Tus at Ter sites; possibly involved in DNA recombination<ref name='LIB:EcoGene'/>
Replicative DNA helicase; DNA-dependent ATPase involved in DNA synthesis; binds DNA contrahelicase termination protein Tus at Ter sites; possibly involved in DNA recombination<ref name='LIB:EcoGene'/>
|-
|-
!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
||
||
replicative DNA helicase<ref name='LIB:Riley_2006'/>, B4052<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GrpD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GrpA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GroP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DnaB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
replicative DNA helicase<ref name='LIB:Riley_2006'/>, B4052<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GrpD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GrpA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, GroP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DnaB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
|-
|-
!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
||
||


|-
|-
!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
||
 
|-
!align=left {{table_heading_style}} |Regulation/Expression
||
||
transcription unit(s): [[:Category:Txn_unit:dnaB|dnaB]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:dnaB|dnaB]]<ref name='LIB:EcoCyc10.6'/>  
|-
|-
!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
||


|-
!align=left {{table_heading_style}} |Quick Links
||
[http://ecoliwiki.net/tools/display_dna.php?gene=dnaB&loc=MG1655:4262337..4263752,W3110:4267904..4269319,DH10B:4362033..4363448,REL606:4243246..4244661 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4243246&end=4244661&gene=dnaB&aa=magnkpfnkqqaeprerdpqvaglkvpphsieaeqsvlgglmldnerwddvaervvaddfytrphrhiftemarlqesgspidlitlaeslerqgqldsvggfaylaelskntpsaanisayadivreravvremisvaneiaeagfdpqgrtsedlldlaesrvfkiaesrankdegpkniadvldatvarieqlfqqphdgvtgvntgyddlnkktaglqpsdliivaarpsmgkttfamnlvenaamlqdkpvlifslempseqimmrslaslsrvdqtkirtgqlddedwarisgtmgillekrniyiddssgltptevrsrarriarehggiglimidylqlmrvpalsdnrtleiaeisrslkalakelnvpvvalsqlnrsleqradkrpvnsdlresgsieqdadlimfiyrdevyhensdlkgiaeiiigkqrngpigtvrltfngqwsrfdnyagpqydde Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dnaB+AND+escherichia+coli Pubmed(dnaB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=dnaB Textpresso(dnaB)]


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  

Revision as of 00:03, 22 January 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

dnaB

Gene Synonym(s)

ECK4044, b4052, JW4012, groP, grpA, grpD[1]

Product Desc.

DnaB[2][3];

Component of replicative DNA helicase[3]; primosome[3]

Replicative DNA helicase; DNA-dependent ATPase involved in DNA synthesis; binds DNA contrahelicase termination protein Tus at Ter sites; possibly involved in DNA recombination[4]

Product Synonyms(s)

replicative DNA helicase[1], B4052[2][1], GrpD[2][1], GrpA[2][1], GroP[2][1], DnaB[2][1]

Function from GO
Knock-Out Phenotype
Regulation/Expression

transcription unit(s): dnaB[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(dnaB)    Textpresso(dnaB)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


The dnaB gene is essential.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=dnaB:Quickview&oldid=1032040"