argP:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''argP'' | ''argP'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2912, b2916, JW2883, iciA''<ref name='LIB:Riley_2006'/><ref name='PMID:10600368'/> | ''ECK2912, b2916, JW2883, iciA''<ref name='LIB:Riley_2006'/><ref name='PMID:10600368'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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ArgP transcriptional activator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ArgP transcriptional activator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Arginine and lysine responsive transcriptional regulator; inhibitor of chromosome initiation; positive regulator of argK, negative autoregulator in presence of arginine; oriC iteron (13-mer) binding protein, competes with DnaA for iteron binding; activate<ref name='LIB:EcoGene'/> | Arginine and lysine responsive transcriptional regulator; inhibitor of chromosome initiation; positive regulator of argK, negative autoregulator in presence of arginine; oriC iteron (13-mer) binding protein, competes with DnaA for iteron binding; activate<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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DNA-binding transcriptional activator, replication initiation inhibitor<ref name='LIB:Riley_2006'/>, B2916<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ArgP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IciA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/><ref name='PMID:10600368' /> | DNA-binding transcriptional activator, replication initiation inhibitor<ref name='LIB:Riley_2006'/>, B2916<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ArgP<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IciA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/><ref name='PMID:10600368' /> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Biological Process''' | |||
* GO:0006350 transcription ([http://www.geneontology.org/GO.evidence.shtml IDA,IEP]) | |||
* GO:0006261 DNA-dependent DNA replication ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Molecular Function''' | |||
* GO:0016563 transcription activator activity ([http://www.geneontology.org/GO.evidence.shtml IDA,IEP]) | |||
* GO:0043565 sequence-specific DNA binding ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
* GO:0016564 transcription repressor activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:argP|argP]]<ref name='LIB:EcoCyc10.6'/>, iciA | transcription unit(s): [[:Category:Txn_unit:argP|argP]]<ref name='LIB:EcoCyc10.6'/>, iciA | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=argP&loc=MG1655:3057775..3058668,W3110:3058409..3059302,DH10B:3151645..3152538 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3151645&end=3152538&gene=argP&aa=mkrpdyrtlqaldavirergferaaqklcitqsavsqrikqlenmfgqpllvrtvpprpteqgqkllallrqvelleeewlgdeqtgstplllslavnadslatwllpalapvladspirlnlqvedetrtqerlrrgevvgavsiqhqalpsclvdklgaldylfvsskpfaekyfpngvtrsallkapvvafdhlddmhqaflqqnfdlppgsvpchivnsseafvqlarqgttccmiphlqiekelasgelidltpglfqrrmlywhrfapesrmmrkvtdalldyghkvlrqd Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=argP+AND+escherichia+coli Pubmed(argP)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=argP Textpresso(argP)] | |||
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Revision as of 00:11, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
argP |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
ArgP transcriptional activator[3][4] Arginine and lysine responsive transcriptional regulator; inhibitor of chromosome initiation; positive regulator of argK, negative autoregulator in presence of arginine; oriC iteron (13-mer) binding protein, competes with DnaA for iteron binding; activate[5] |
| Product Synonyms(s) |
DNA-binding transcriptional activator, replication initiation inhibitor[1], B2916[3][1], ArgP[3][1], IciA[3][1][2] |
| Function from GO |
Biological Process
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
ArgP(IciA) is a LysR family transcriptional regulator. argP mutants are canavanine sensitive. argP is in the pho regulon. ArgP activates the dapB gene in te absense of lysine (Bouvier, 2008).[5]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 Celis, RT (1999) Repression and activation of arginine transport genes in Escherichia coli K 12 by the ArgP protein. J. Mol. Biol. 294 1087-95 PubMed
- ↑ 3.0 3.1 3.2 3.3 3.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 5.0 5.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.