Template:GO table reference: Difference between revisions

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Qualifier||qualifier|select| |NOT|Contributes to|Colocalizes with|Obsolete GO term|Under review
Qualifier||qualifier|select| |NOT|Contributes to|Colocalizes with|Obsolete GO term|Under review
GO ID||go_id|text
GO ID||go_id|text
GO term name||go_term|lookupcalc|SELECT page_title FROM GO_archive.term WHERE go_id = '{{{go_id}}}' ORDER BY term_update DESC LIMIT 1|page_title|split|_!_|1
GO term name||go_term|GoTermLookup
Evidence Code||evidence|select| |EXP: Inferred from Experiment|IDA: Inferred from Direct Assay|IPI: Inferred from Physical Interaction|IMP: Inferred from Mutant Phenotype|IGI: Inferred from Genetic Interaction|IEP: Inferred from Expression Pattern|ISS: Inferred from Sequence or Structural Similarity|ISO: Inferred from Sequence Orthology|ISA: Inferred from Sequence Alignment|ISM: Inferred from Sequence Model|IGC: Inferred from Genomic Context|RCA: inferred from Reviewed Computational Analysis|TAS: Traceable Author Statement|NAS: Non-traceable Author Statement|IC: Inferred by Curator|ND: No biological Data available|IEA: Inferred from Electronic Annotation|
Evidence Code||evidence|select| |EXP: Inferred from Experiment|IDA: Inferred from Direct Assay|IPI: Inferred from Physical Interaction|IMP: Inferred from Mutant Phenotype|IGI: Inferred from Genetic Interaction|IEP: Inferred from Expression Pattern|ISS: Inferred from Sequence or Structural Similarity|ISO: Inferred from Sequence Orthology|ISA: Inferred from Sequence Alignment|ISM: Inferred from Sequence Model|IGC: Inferred from Genomic Context|RCA: inferred from Reviewed Computational Analysis|TAS: Traceable Author Statement|NAS: Non-traceable Author Statement|IC: Inferred by Curator|ND: No biological Data available|IEA: Inferred from Electronic Annotation|
with/from||with|go_annotation|EcoliWiki|UniProtKB|InterPro|EcoCyc
with/from||with|go_annotation|EcoliWiki|UniProtKB|InterPro|EcoCyc
Aspect||aspect|lookup|SELECT namespace from GO_archive.term WHERE go_id = '{{{go_id}}}' ORDER BY term_update DESC LIMIT 1|namespace
Aspect||aspect|AspectLookup
Notes||Notes
Notes||Notes
Status||status|go_annotation
Status||status|go_annotation

Revision as of 20:19, 9 March 2010

<headings> Gene product||product Qualifier||qualifier|select| |NOT|Contributes to|Colocalizes with|Obsolete GO term|Under review GO ID||go_id|text GO term name||go_term|GoTermLookup Evidence Code||evidence|select| |EXP: Inferred from Experiment|IDA: Inferred from Direct Assay|IPI: Inferred from Physical Interaction|IMP: Inferred from Mutant Phenotype|IGI: Inferred from Genetic Interaction|IEP: Inferred from Expression Pattern|ISS: Inferred from Sequence or Structural Similarity|ISO: Inferred from Sequence Orthology|ISA: Inferred from Sequence Alignment|ISM: Inferred from Sequence Model|IGC: Inferred from Genomic Context|RCA: inferred from Reviewed Computational Analysis|TAS: Traceable Author Statement|NAS: Non-traceable Author Statement|IC: Inferred by Curator|ND: No biological Data available|IEA: Inferred from Electronic Annotation| with/from||with|go_annotation|EcoliWiki|UniProtKB|InterPro|EcoCyc Aspect||aspect|AspectLookup Notes||Notes Status||status|go_annotation </headings> <heading_style>align='left' bgcolor='#CCCCFF'</heading_style>

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