ahpC:Evolution: Difference between revisions

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Revision as of 23:56, 8 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000026815 (score: 1.000; bootstrap: 98%)
  • ENSANGP00000010951 (score: 1.000; bootstrap: 99%)
  • ENSANGP00000019782 (score: 0.502)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000033015 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G06290 (score: 1.000; bootstrap: 99%)
  • AT3G11630 (score: 0.777)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000011505 (score: 1.000; bootstrap: 99%)
  • ENSBTAP00000015996 (score: 0.366)
  • ENSBTAP00000008107 (score: 0.348)
  • ENSBTAP00000004751 (score: 0.242)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00025442 (score: 1.000; bootstrap: 99%)
  • WBGene00037564 (score: 0.114)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00006434 (score: 1.000; bootstrap: 99%)
  • WBGene00011110 (score: 0.447)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000025278 (score: 1.000; bootstrap: 99%)
  • ENSCAFP00000006827 (score: 0.668)
  • ENSCAFP00000003384 (score: 0.592)
  • ENSCAFP00000019709 (score: 0.513)
  • ENSCAFP00000017833 (score: 0.453)
  • ENSCAFP00000007440 (score: 0.415)
  • ENSCAFP00000008263 (score: 0.351)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000007255 (score: 1.000; bootstrap: 99%)
  • ENSCINP00000013246 (score: 0.367)
  • ENSCINP00000006141 (score: 0.338)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040718-170 (score: 1.000; bootstrap: 99%)
  • ZDB-CDNA-040718-193 (score: 1.000; bootstrap: 99%)
  • ZDB-CDNA-050320-35 (score: 0.729)
  • ZDB-GENE-050320-35 (score: 0.729)
  • ZDB-CDNA-050320-21 (score: 0.469)
  • ZDB-CDNA-050417-74 (score: 0.465)
  • ZDB-GENE-030826-18 (score: 0.465)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0231647 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0038519 (score: 1.000; bootstrap: 96%)
  • FBgn0040308 (score: 0.350)
  • FBgn0040309 (score: 0.297)
  • FBgn0036490 (score: 0.209)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA19159-PA (score: 1.000; bootstrap: 99%)
  • GA11781-PA (score: 0.305)
  • GA14060-PA (score: 0.284)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000015246 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000026337 (score: 0.351)
  • ENSGALP00000016629 (score: 0.332)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000298510 (score: 1.000; bootstrap: 99%)
  • ENSP00000319964 (score: 0.357)
  • ENSP00000301522 (score: 0.336)
  • ENSP00000262746 (score: 0.328)
  • ENSP00000338995 (score: 0.056)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000010873 (score: 1.000; bootstrap: 99%)
  • ENSMMUP00000028144 (score: 0.354)
  • ENSMMUP00000007512 (score: 0.244)
  • ENSMMUP00000008176 (score: 0.239)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000008649 (score: 1.000; bootstrap: 99%)
  • ENSMODP00000002901 (score: 0.637)
  • ENSMODP00000009688 (score: 0.548)
  • ENSMODP00000011601 (score: 0.489)

From Inparanoid:20070104

Mus musculus

  • MGI:109486 (score: 1.000; bootstrap: 99%)
  • MGI:99523 (score: 0.668)
  • MGI:3645884 (score: 0.629)
  • MGI:1859815 (score: 0.529)
  • MGI:88034 (score: 0.467)

From Inparanoid:20070104

Oryza gramene

  • O81480 (score: 1.000; bootstrap: 99%)
  • Q96468 (score: 0.723)
  • P80602 (score: 0.720)
  • Q6ER94 (score: 0.696)
  • Q7X679 (score: 0.258)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000001167 (score: 1.000; bootstrap: 99%)
  • ENSPTRP00000037272 (score: 0.335)
  • ENSPTRP00000017998 (score: 0.248)
  • ENSPTRP00000004125 (score: 0.198)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000004799 (score: 1.000; bootstrap: 99%)
  • ENSRNOP00000023132 (score: 0.688)
  • ENSRNOP00000023972 (score: 0.677)
  • ENSRNOP00000043982 (score: 0.502)
  • ENSRNOP00000015186 (score: 0.460)
  • ENSRNOP00000029235 (score: 0.266)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YDR453C (score: 1.000; bootstrap: 90%)
  • YML028W (score: 0.865)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC5763c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000135519 (score: 1.000; bootstrap: 99%)
  • NEWSINFRUP00000151126 (score: 0.714)
  • NEWSINFRUP00000159443 (score: 0.530)
  • NEWSINFRUP00000139714 (score: 0.440)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00013358001 (score: 1.000; bootstrap: 99%)
  • GSTENP00022646001 (score: 0.717)
  • GSTENP00019030001 (score: 0.517)
  • GSTENP00037525001 (score: 0.212)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000024196 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Shigella flexneri

AHPC

From SHIGELLACYC

E. coli O157

AHPC

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

PFAM (EcoliWiki Page)

PFAM:PF00578


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Notes

Links

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References

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Categories

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