cysN:Gene Product(s): Difference between revisions

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InterPro:IPR011779
InterPro:IPR011779
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F
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Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
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complete
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GO:0016779
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nucleotidyltransferase activity
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GO_REF:0000004
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IEA: Inferred from Electronic Annotation
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SP_KW:KW-0548
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F
F
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required fields missing   
required fields missing   
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GO:0016779
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nucleotidyltransferase activity
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GO_REF:0000004
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IEA: Inferred from Electronic Annotation
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SP_KW:KW-0548
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F
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Seeded from EcoCyc <ref name = 'LIB:EcoCyc13.0'/>
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complete


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GKKTRARVDG IRYQVDINNL TQREVENLPL NGIGLVDLTF DEPLVLDRYQ QNPVTGGLIF
GKKTRARVDG IRYQVDINNL TQREVENLPL NGIGLVDLTF DEPLVLDRYQ QNPVTGGLIF
IDRLSNVTVG AGMVHEPVSQ ATAAPSEFSA FELELNALVR RHFPHWGARD LLGDK</pre>  
IDRLSNVTVG AGMVHEPVSQ ATAAPSEFSA FELELNALVR RHFPHWGARD LLGDK</pre>  
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!align=left {{table heading style}} |Length
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475
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!align=left {{table heading style}} |Mol. Wt
!align=left {{table heading style}} |Mol. Wt

Revision as of 17:49, 10 April 2009

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Domains Structure Resources Accessions Links References Suggestions

Nomenclature

See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Standard name

CysN

Synonyms

sulfate adenylyltransferase, subunit 1[1], B2751[2][1], CysN[2][1]

Product description

CysN[2][3];

Component of SULFATE-ADENYLYLTRANS-CPLX[2]; sulfate adenylyltransferase[3]

Gtp subunit of ATP sulfurylase[4]

EC number (for enzymes)
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Notes

Function

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Gene Ontology
See Help:Gene_ontology for help entering or editing GO terms and GO annotations in EcoliWiki.

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0000103

sulfate assimilation

GO_REF:0000020

IEA: Inferred from Electronic Annotation

HAMAP:MF_00062

P

Seeded from EcoCyc [5]

complete

GO:0000166

nucleotide binding

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0547

F

Seeded from EcoCyc [5]

complete

GO:0003924

GTPase activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000795

F

Seeded from EcoCyc [5]

complete

GO:0004781

sulfate adenylyltransferase (ATP) activity

GO_REF:0000003
GO_REF:0000020

IEA: Inferred from Electronic Annotation

EC:2.7.7.4
HAMAP:MF_00062

F

Seeded from EcoCyc 12.5 [6]

complete

GO:0005525

GTP binding

GO_REF:0000002
GO_REF:0000002
GO_REF:0000004
GO_REF:0000020

IEA: Inferred from Electronic Annotation

InterPro:IPR000795
InterPro:IPR004161
SP_KW:KW-0342
HAMAP:MF_00062

F

Seeded from EcoCyc 12.5 [6]

complete

GO:0008652

amino acid biosynthetic process

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0028

P

Seeded from EcoCyc 12.5 [6]

complete

GO:0016740

transferase activity

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0808

F

Seeded from EcoCyc [5]

complete

GO:0016772

transferase activity, transferring phosphorus-containing groups

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR011779

F

Seeded from EcoCyc [5]

complete

GO:0016779

nucleotidyltransferase activity

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0548

F

Seeded from EcoCyc [5]

complete

GO:0019344

cysteine biosynthetic process

GO_REF:0000004
GO_REF:0000020

IEA: Inferred from Electronic Annotation

SP_KW:KW-0198
HAMAP:MF_00062

P

Seeded from EcoCyc 12.5 [6]

complete

GO:0005515

protein binding

PMID:16606699[7]

IPI: Inferred from Physical Interaction

UniProtKB:Q57261

F

Seeded from EcoCyc [5]

complete

GO:0005737

cytoplasm

C

Seeded from Riley et al 2006 [1].

required fields missing

GO:0006790

sulfur metabolic process

P

Seeded from EcoCyc 11.1[3].

required fields missing

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Interactions See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence

Protein

Subunits of SULFATE-ADENYLYLTRANS-CPLX

could be indirect

Protein

truD

PMID:16606699[7]

Experiment(s):EBI-1143830

Protein

Subunits of sulfate adenylyltransferase

could be indirect


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Notes

Localization

See Help:Product_localization for how to add or edit information in this section of EcoliWiki.

Compartment Description Evidence Notes
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Notes

Structure and Physical Properties

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Physical Properties See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Sequence

at EcoCyc 

MNTALAQQIA NEGGVEAWMI AQQHKSLLRF LTCGSVDDGK STLIGRLLHD TRQIYEDQLS
SLHNDSKRHG TQGEKLDLAL LVDGLQAERE QGITIDVAYR YFSTEKRKFI IADTPGHEQY
TRNMATGAST CELAILLIDA RKGVLDQTRR HSFISTLLGI KHLVVAINKM DLVDYSEETF
TRIREDYLTF AGQLPGNLDI RFVPLSALEG DNVASQSESM PWYSGPTLLE VLETVEIQRV
VDAQPMRFPV QYVNRPNLDF RGYAGTLASG RVEVGQRVKV LPSGVESNVA RIVTFDGDRE
EAFAGEAITL VLTDEIDISR GDLLLAADEA LPAVQSASVD VVWMAEQPLS PGQSYDIKIA
GKKTRARVDG IRYQVDINNL TQREVENLPL NGIGLVDLTF DEPLVLDRYQ QNPVTGGLIF
IDRLSNVTVG AGMVHEPVSQ ATAAPSEFSA FELELNALVR RHFPHWGARD LLGDK
Length

475

Mol. Wt

52.56 kDa (calc) [2]

pI

5.22[2]

Extinction coefficient

39880 - 40130 (calc based on 12 Y, 4 W, and 2 C residues)

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Domains/Motifs/Modification Sites See Help:Product_domains_motifs for help entering or editing information in this section of EcoliWiki.

Type Residues Description Notes
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Structure See Help:Product_structure for help entering or editing information in this section of EcoliWiki.

Structures

<beststructure>cysN 562</beststructure>

Models

View models at:

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Notes

Gene Product Resources

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See Help:Product_resources for help with entering or editing information in this section of EcoliWiki.

Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:CYSN-MONOMER

SwissModel (EcoliWiki Page)

SwissModel:P23845

UniProt (EcoliWiki Page)

UniProt:P23845

PFAM (EcoliWiki Page)

PFAM:PF00009

RefSeq (EcoliWiki Page)

RefSeq:NP_417231

ModBase (EcoliWiki Page)

ModBase:P23845


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Notes

Links

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Name URL Comments
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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ 5.0 5.1 5.2 5.3 5.4 5.5 5.6 EcoCyc (release 13.0; 2009) Keseler, IM et al. (2009) Nucleic Acids Res. 37(Database issue):D464-70
  6. ↑ 6.0 6.1 6.2 6.3 EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  7. ↑ 7.0 7.1 Arifuzzaman, M et al. (2006) Large-scale identification of protein-protein interaction of Escherichia coli K-12. Genome Res. 16 686-91 PubMed


Categories

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