EcoliWiki:Wishlist: Difference between revisions
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===What we would like to see?=== | ===What we would like to see?=== | ||
*Search and type greek and non-English characters or some toolbar for it (lambda vs. the symbol, delta, sigma, etc.) | *Search and type greek and non-English characters or some toolbar for it (lambda vs. the symbol, delta, sigma, etc.) | ||
*Search for phenotype and output is a list of genes | *Search for phenotype and output is a list of genes | ||
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*Have the "edit toolbar" visible when editing tables | *Have the "edit toolbar" visible when editing tables | ||
*Info on or list of compounds that can be taken up by coli e.g. cAMP? | *Info on or list of compounds that can be taken up by coli e.g. cAMP? | ||
*Make TMHMM available to users on this site | *Make TMHMM available to users on this site | ||
*Promoter prediction tools | *Promoter prediction tools | ||
== Done == | == Done == | ||
*Make TMHMM predictions and put that information on the gene products page | |||
*Find based on three letter gene name prefix | |||
*List of [[Essential genes]] | *List of [[Essential genes]] | ||
*CGSC Strain list - we don't have plans to enter all the strains, but we now have all the mutant alleles from CGSC in the allele tables, along with links to CGSC. | *CGSC Strain list - we don't have plans to enter all the strains, but we now have all the mutant alleles from CGSC in the allele tables, along with links to CGSC. | ||
Revision as of 15:16, 27 October 2008
Wishlist
The EcoliWiki team strives to make the Wiki better. To that end, we are asking for your opinion. If there is a feature not currently available in EcoliWiki that you would like to see, describe it here. Extended discussion of different requested features can go on the discussion page.
Subunit Composition
- Component term could be more descriptive with addition of subunit compositions (ie homomultimer/heteromultimer)
What's up and coming for EcoliWiki v2
- Searching for information present in the tables specifically
- If I search for multiple genes in EcoliWiki, it would be nice for the output to be given in some delimited form.
What we would like to see?
- Search and type greek and non-English characters or some toolbar for it (lambda vs. the symbol, delta, sigma, etc.)
- Search for phenotype and output is a list of genes
- References- Pubmed Central IDs (for things w/o PMIDs)
- A "Go To" alphabet to organize the category pages
- RNAs in W3110
- links to RFAM
- pulldown menus for RNAs in Gbrowse
- synthetic lethal databaseSmrlab
- interactome data baseSmrlab-Butland, Mori, other studies you had in mind
- Have the "edit toolbar" visible when editing tables
- Info on or list of compounds that can be taken up by coli e.g. cAMP?
- Make TMHMM available to users on this site
- Promoter prediction tools
Done
- Make TMHMM predictions and put that information on the gene products page
- Find based on three letter gene name prefix
- List of Essential genes
- CGSC Strain list - we don't have plans to enter all the strains, but we now have all the mutant alleles from CGSC in the allele tables, along with links to CGSC.
- References- Automatic DOI's for all PMID articles. DOI's are available from PubMed/MEDLINE and hopefully can be automatically imported when the article abstract is imported. Prepending "http://dx.doi.org/" to a DOI gives a URL that takes the user directly to the journal's version of the online article. See, e.g, the Links section of the table on the PMID:17244358 page.
- DOI links will be created on all new PMID pages.
- Video clip upload
- Not exactly upload, but you can upload to YouTube or Google Video and embed the videos here.