uhpA:Gene Product(s): Difference between revisions

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!Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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GO:0006350  
[[Category:GO:0006350_!_transcription]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0006350_!_transcription GO:0006350]
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transcription  
transcription  
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required fields missing   
required fields missing   
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GO:0005737  
[[Category:GO:0005737_!_cytoplasm]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0005737_!_cytoplasm GO:0005737]
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cytoplasm  
cytoplasm  
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required fields missing   
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GO:0016563  
[[Category:GO:0016563_!_transcription_activator_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0016563_!_transcription_activator_activity GO:0016563]
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transcription activator activity  
transcription activator activity  
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GO:0016052  
[[Category:GO:0016052_!_carbohydrate_catabolic_process]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0016052_!_carbohydrate_catabolic_process GO:0016052]
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carbohydrate catabolic process  
carbohydrate catabolic process  
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[[Category:GO:0000156_!_two-component_response_regulator_activity]][http://gowiki.tamu.edu/wiki/index.php/Category:GO:0000156_!_two-component_response_regulator_activity GO:0000156]
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two-component_response_regulator_activity
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[http://www.geneontology.org/cgi-bin/references.cgi/#GO_REF:0000002 GO_REF:0000002]<br />
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IEA: Inferred from Electronic Annotation
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InterPro:IPR001789
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F
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Seeded from EcoCyc 12.5 <ref name = 'LIB:EcoCyc12.5'/>
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Revision as of 21:54, 29 September 2008

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Nomenclature Function Interactions Localization Sequence Structure Resources Accessions Links References Suggestions

Nomenclature

Standard name

UhpA product

Synonyms

B3669 product[1], response regulator, positive activator of uhpT transcription (sensor, uhpB) product[1], transcriptional regulatory protein UhpA product[1], unphosphorylated transcriptional regulatory protein UhpA product[1], unmodified transcriptional regulatory protein UhpA product[1]

Product description

UhpA transcriptional activator[1][2]

EC number (for enzymes)
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See Help:Product_nomenclature for help entering or editing information in this section of EcoliWiki.

Notes

Function

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Gene Ontology

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0006350

transcription

P

Seeded from EcoCyc 11.1[2].

required fields missing

GO:0005737

cytoplasm

C

Seeded from EcoCyc 11.1[2].

required fields missing

GO:0016563

transcription activator activity

F

Seeded from EcoCyc 11.1[2].

required fields missing

GO:0016052

carbohydrate catabolic process

P

Seeded from EcoCyc 11.1[2].

required fields missing

GO:0000156

two-component_response_regulator_activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001789

F

Seeded from EcoCyc 12.5 [3]


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Interactions

Partner Type Partner Notes
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Notes

Downregulates glucose-6-phosphate and fructose-6-phosphate respiration in E. coli. Zhou (2003)

Localization

Compartment Description Evidence Notes

cytoplasm

From EcoCyc[2]

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Notes

Structure and Physical Properties

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Physical Properties

Sequence

at EcoCyc 

MITVALIDDH LIVRSGFAQL LGLEPDLQVV AEFGSGREAL AGLPGRGVQV CICDISMPDI
SGLELLSQLP KGMATIMLSV HDSPALVEQA LNAGARGFLS KRCSPDELIA AVHTVATGGC
YLTPDIAIKL ASGRQDPLTK RERQVAEKLA QGMAVKEIAA ELGLSPKTVH VHRANLMEKL
GVSNDVELAR RMFDGW
Mol. Wt

20.89 kDa (calc) [1]

pI
Extinction coefficient

6990 - 7490 (calc based on 1 Y, 1 W, and 4 C residues)

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See Help:Product_physical_properties for help entering or editing information about the physical properties of this gene product.

Domains/Motifs/Modification Sites

Type Residues Description Notes
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Structure

Structure Type Organism Accession Residues covered Notes
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Notes

Gene Product Resources

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Resource type Source Notes/Reference
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Notes

Accessions in Other Databases

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Database Accession Notes

EcoCyc (EcoliWiki Page)

EcoCyc:PHOSPHO-UHPA

UniProt (EcoliWiki Page)

UniProt:P0AGA6

PFAM (EcoliWiki Page)

PFAM:PF00072

RefSeq (EcoliWiki Page)

RefSeq:NP_418125

ModBase (EcoliWiki Page)

ModBase:P0AGA6

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Notes

Links

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Name URL Comments
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References

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See Help:References for how to manage references in EcoliWiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 12.5; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7


Categories

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