pepN:Evolution: Difference between revisions

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!Organism!!Homologs (Statistics)!!Comments
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''Arabidopsis thaliana''   
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''Takifugu rubripes''   
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{{Evolution_homologs_table_help}}
 


===Do-It-Yourself Web Tools===
===Do-It-Yourself Web Tools===
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!Database!!Accession!!Notes
!|Database!!Accession!!Notes
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])  
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01433 PFAM:PF01433]
[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01433 PFAM:PF01433]
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<protect><!--Families_notes--></protect>
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===Notes===
===Notes===
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{{Links_help}}
 


==References==
==References==
{{BacktoTop}}
{{BacktoTop}}
{{RefHelp}}
 
<references/>
<references/>
<noinclude>
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Revision as of 21:46, 21 January 2009

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000021233 (score: 1.000; bootstrap: 87%)
  • ENSANGP00000012865 (score: 0.900)
  • ENSANGP00000021236 (score: 0.639)
  • ENSANGP00000003366 (score: 0.230)
  • ENSANGP00000023545 (score: 0.217)
  • ENSANGP00000007943 (score: 0.204)
  • ENSANGP00000023446 (score: 0.194)
  • ENSANGP00000025222 (score: 0.193)
  • ENSANGP00000017786 (score: 0.193)
  • ENSANGP00000021306 (score: 0.192)
  • ENSANGP00000025553 (score: 0.190)
  • ENSANGP00000022062 (score: 0.190)
  • ENSANGP00000028917 (score: 0.180)
  • ENSANGP00000004057 (score: 0.179)
  • ENSANGP00000020286 (score: 0.179)
  • ENSANGP00000002729 (score: 0.163)
  • ENSANGP00000026472 (score: 0.149)
  • ENSANGP00000014416 (score: 0.117)
  • ENSANGP00000001203 (score: 0.058)
  • ENSANGP00000019570 (score: 0.056)
  • ENSANGP00000019854 (score: 0.055)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000013649 (score: 1.000; bootstrap: 100%)
  • ENSAPMP00000030882 (score: 0.257)
  • ENSAPMP00000013702 (score: 0.155)
  • ENSAPMP00000016341 (score: 0.111)
  • ENSAPMP00000021637 (score: 0.089)
  • ENSAPMP00000021184 (score: 0.066)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT1G63770 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000026511 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000001164 (score: 0.331)
  • ENSBTAP00000018026 (score: 0.321)
  • ENSBTAP00000010972 (score: 0.195)
  • ENSBTAP00000015199 (score: 0.192)
  • ENSBTAP00000022456 (score: 0.189)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00028571 (score: 1.000; bootstrap: 100%)
  • WBGene00030119 (score: 0.443)
  • WBGene00031083 (score: 0.052)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000009652 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000015520 (score: 0.257)
  • ENSCAFP00000018660 (score: 0.177)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000018878 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040426-2477 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-3424 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040718-269 (score: 0.259)
  • ZDB-GENE-040718-241 (score: 0.259)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0191291 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0015541 (score: 1.000; bootstrap: 100%)
  • FBgn0039640 (score: 0.197)
  • FBgn0040282 (score: 0.195)
  • FBgn0051445 (score: 0.189)
  • FBgn0052473 (score: 0.152)
  • FBgn0038136 (score: 0.142)
  • FBgn0038135 (score: 0.142)
  • FBgn0035226 (score: 0.131)
  • FBgn0030223 (score: 0.127)
  • FBgn0051198 (score: 0.121)
  • FBgn0046253 (score: 0.108)
  • FBgn0051343 (score: 0.102)
  • FBgn0030222 (score: 0.100)
  • FBgn0051233 (score: 0.097)
  • FBgn0039656 (score: 0.080)
  • FBgn0039064 (score: 0.068)
  • FBgn0038897 (score: 0.067)
  • FBgn0051177 (score: 0.064)
  • FBgn0036186 (score: 0.064)
  • FBgn0028935 (score: 0.061)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000018616 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000000506 (score: 0.201)
  • ENSGALP00000013530 (score: 0.196)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000228740 (score: 1.000; bootstrap: 100%)
  • ENSP00000295640 (score: 0.254)
  • ENSP00000270357 (score: 0.140)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000009957 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000000631 (score: 0.277)
  • ENSMODP00000003345 (score: 0.149)

From Inparanoid:20070104

Mus musculus

  • MGI:96836 (score: 1.000; bootstrap: 100%)
  • MGI:2384902 (score: 0.257)
  • MGI:1914170 (score: 0.144)

From Inparanoid:20070104

Oryza gramene

  • Q6ZBX8 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000009041 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000003083 (score: 0.210)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000005930 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000009198 (score: 0.252)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YNL045W (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC13225c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000164776 (score: 1.000; bootstrap: 68%)
  • NEWSINFRUP00000180368 (score: 0.335)
  • NEWSINFRUP00000177865 (score: 0.283)
  • NEWSINFRUP00000182756 (score: 0.196)
  • NEWSINFRUP00000157582 (score: 0.167)
  • NEWSINFRUP00000148362 (score: 0.149)
  • NEWSINFRUP00000159528 (score: 0.143)
  • NEWSINFRUP00000171131 (score: 0.128)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00005050001 (score: 1.000; bootstrap: 100%)
  • GSTENP00021140001 (score: 0.137)
  • GSTENP00001493001 (score: 0.081)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000051247 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

PEPN

From SHIGELLACYC

E. coli O157

PEPN

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

PFAM (EcoliWiki Page)

PFAM:PF01433


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Notes

Links

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Name URL Comments
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References

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Categories

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