pepN:Evolution

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Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000021233 (score: 1.000; bootstrap: 87%)
  • ENSANGP00000012865 (score: 0.900)
  • ENSANGP00000021236 (score: 0.639)
  • ENSANGP00000003366 (score: 0.230)
  • ENSANGP00000023545 (score: 0.217)
  • ENSANGP00000007943 (score: 0.204)
  • ENSANGP00000023446 (score: 0.194)
  • ENSANGP00000025222 (score: 0.193)
  • ENSANGP00000017786 (score: 0.193)
  • ENSANGP00000021306 (score: 0.192)
  • ENSANGP00000025553 (score: 0.190)
  • ENSANGP00000022062 (score: 0.190)
  • ENSANGP00000028917 (score: 0.180)
  • ENSANGP00000004057 (score: 0.179)
  • ENSANGP00000020286 (score: 0.179)
  • ENSANGP00000002729 (score: 0.163)
  • ENSANGP00000026472 (score: 0.149)
  • ENSANGP00000014416 (score: 0.117)
  • ENSANGP00000001203 (score: 0.058)
  • ENSANGP00000019570 (score: 0.056)
  • ENSANGP00000019854 (score: 0.055)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000013649 (score: 1.000; bootstrap: 100%)
  • ENSAPMP00000030882 (score: 0.257)
  • ENSAPMP00000013702 (score: 0.155)
  • ENSAPMP00000016341 (score: 0.111)
  • ENSAPMP00000021637 (score: 0.089)
  • ENSAPMP00000021184 (score: 0.066)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT1G63770 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000026511 (score: 1.000; bootstrap: 100%)
  • ENSBTAP00000001164 (score: 0.331)
  • ENSBTAP00000018026 (score: 0.321)
  • ENSBTAP00000010972 (score: 0.195)
  • ENSBTAP00000015199 (score: 0.192)
  • ENSBTAP00000022456 (score: 0.189)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00028571 (score: 1.000; bootstrap: 100%)
  • WBGene00030119 (score: 0.443)
  • WBGene00031083 (score: 0.052)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000009652 (score: 1.000; bootstrap: 100%)
  • ENSCAFP00000015520 (score: 0.257)
  • ENSCAFP00000018660 (score: 0.177)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000018878 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-040426-2477 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040425-3424 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-040718-269 (score: 0.259)
  • ZDB-GENE-040718-241 (score: 0.259)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0191291 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0015541 (score: 1.000; bootstrap: 100%)
  • FBgn0039640 (score: 0.197)
  • FBgn0040282 (score: 0.195)
  • FBgn0051445 (score: 0.189)
  • FBgn0052473 (score: 0.152)
  • FBgn0038136 (score: 0.142)
  • FBgn0038135 (score: 0.142)
  • FBgn0035226 (score: 0.131)
  • FBgn0030223 (score: 0.127)
  • FBgn0051198 (score: 0.121)
  • FBgn0046253 (score: 0.108)
  • FBgn0051343 (score: 0.102)
  • FBgn0030222 (score: 0.100)
  • FBgn0051233 (score: 0.097)
  • FBgn0039656 (score: 0.080)
  • FBgn0039064 (score: 0.068)
  • FBgn0038897 (score: 0.067)
  • FBgn0051177 (score: 0.064)
  • FBgn0036186 (score: 0.064)
  • FBgn0028935 (score: 0.061)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000018616 (score: 1.000; bootstrap: 100%)
  • ENSGALP00000000506 (score: 0.201)
  • ENSGALP00000013530 (score: 0.196)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000228740 (score: 1.000; bootstrap: 100%)
  • ENSP00000295640 (score: 0.254)
  • ENSP00000270357 (score: 0.140)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000009957 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000000631 (score: 0.277)
  • ENSMODP00000003345 (score: 0.149)

From Inparanoid:20070104

Mus musculus

  • MGI:96836 (score: 1.000; bootstrap: 100%)
  • MGI:2384902 (score: 0.257)
  • MGI:1914170 (score: 0.144)

From Inparanoid:20070104

Oryza gramene

  • Q6ZBX8 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000009041 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000003083 (score: 0.210)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000005930 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000009198 (score: 0.252)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YNL045W (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPCC13225c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000164776 (score: 1.000; bootstrap: 68%)
  • NEWSINFRUP00000180368 (score: 0.335)
  • NEWSINFRUP00000177865 (score: 0.283)
  • NEWSINFRUP00000182756 (score: 0.196)
  • NEWSINFRUP00000157582 (score: 0.167)
  • NEWSINFRUP00000148362 (score: 0.149)
  • NEWSINFRUP00000159528 (score: 0.143)
  • NEWSINFRUP00000171131 (score: 0.128)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00005050001 (score: 1.000; bootstrap: 100%)
  • GSTENP00021140001 (score: 0.137)
  • GSTENP00001493001 (score: 0.081)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000051247 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

PEPN

From SHIGELLACYC

E. coli O157

PEPN

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF01433 Peptidase family M1

Panther (EcoliWiki Page)

PTHR11533:SF8

Superfamily (EcoliWiki Page)

SUPERFAMILY:55486

Superfamily (EcoliWiki Page)

SUPERFAMILY:63737

Pfam (EcoliWiki Page)

PF11940 Domain of unknown function (DUF3458)

EcoCyc

EcoCyc:EG10696

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG10696

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120000688

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB0690

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0003171

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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